Salinibacter ruber DSM 13855: SRU_1459
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Entry
SRU_1459 CDS
T00312
Symbol
yfcX
Name
(GenBank) fatty oxidation complex, alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sru
Salinibacter ruber DSM 13855
Pathway
sru00071
Fatty acid degradation
sru00280
Valine, leucine and isoleucine degradation
sru00310
Lysine degradation
sru00362
Benzoate degradation
sru00380
Tryptophan metabolism
sru00410
beta-Alanine metabolism
sru00640
Propanoate metabolism
sru00650
Butanoate metabolism
sru00907
Pinene, camphor and geraniol degradation
sru00930
Caprolactam degradation
sru01100
Metabolic pathways
sru01110
Biosynthesis of secondary metabolites
sru01120
Microbial metabolism in diverse environments
sru01200
Carbon metabolism
sru01212
Fatty acid metabolism
Module
sru_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SRU_1459 (yfcX)
00650 Butanoate metabolism
SRU_1459 (yfcX)
09103 Lipid metabolism
00071 Fatty acid degradation
SRU_1459 (yfcX)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SRU_1459 (yfcX)
00310 Lysine degradation
SRU_1459 (yfcX)
00380 Tryptophan metabolism
SRU_1459 (yfcX)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SRU_1459 (yfcX)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SRU_1459 (yfcX)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SRU_1459 (yfcX)
00930 Caprolactam degradation
SRU_1459 (yfcX)
Enzymes [BR:
sru01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SRU_1459 (yfcX)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SRU_1459 (yfcX)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SRU_1459 (yfcX)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
DFP
F420_oxidored
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
ABC44573
UniProt:
Q2S2J8
LinkDB
All DBs
Position
complement(1816929..1819088)
Genome browser
AA seq
719 aa
AA seq
DB search
MPNALSVPTDLLTLTVDETGVATLALDAPDASVNKISWDTLNAFSDALDVVETHADLSGL
VIASGKPDSFIVGADLAMLQTFEIPAEARRLSREAHALGERVRSLPVPTVAALHGPVMGG
GLELALNCDYRVASTADATKMALPEVQLGLLPGGGGTQLLPRLVGVQQALRLMLTGKNTY
PDKARRIGLVDALIHPPGLRHAARRAARELAAGTRTVERAEQSLGDRLLEGNPVSRRVIY
RQARTRTERRTRGNYPAPPRIIDAVRTGMEEGLEAGLDTERQHFGELVFTPESQALVSIF
FAKRDAETNPQPEQARPVDTVGVLGAGLMGSGIAQVSAQNGLDVVLTDQSLALAAEGKKA
IWSAVTEQEDKGIINTFTRDQIVERVAPTADYAPLQAADVVIEAVPEDLSIKHAVLSEVE
TVVDADTVLASNTSALPISTIAEGVDDPSRVLGMHYFSPVPDIPLLEIVVTEETSDEALA
TAYAAGLAQDKTVIVVNDGPGFYTTRILALYMNEALLLFEAGAEIEAVDEAMMDAGFPMG
PFELFDLVGLDVAAKITDVMGEALSPERVDISDRAGRLAEADLLGQKTNRGFYEYDADDD
ADDKDPQGVNDAVYRHRDASSRSTPPAGAIQDRLLLMMVNEAVRCLEDEVLRAPIDGDLG
AVFGLGFPPFLGGPFRHADRAGAASIVDTLQRLADRHGPRFAPADRLQTHAAQDTTFHS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacgccctctctgtgcccacggacctcctgaccctgacggtcgacgagaccgga
gtggccacgctcgcgctggatgcccccgacgcgtcggtcaacaagatctcttgggacacc
ctgaacgcgttttccgacgccctggatgtggttgagacccacgccgacctgtccgggctg
gtgatcgccagcggcaagccggactcgttcatcgtcggggccgacctggcgatgctgcaa
acgttcgagatcccggcggaggcgcggcgcctgagccgcgaggcccacgccctcggggag
cgggtccgaagcctcccggtcccgaccgtggccgccctccacggcccggtgatggggggc
ggcctggagctggcgctcaactgcgactaccgcgtcgcctccaccgccgacgcgaccaag
atggccctacccgaggtgcagctcggccttctgcccggcgggggcggcacccagctgctg
ccgcgcctcgtgggcgtgcagcaggccctcaggctcatgctgaccggaaaaaacacgtac
ccggacaaggcgcggcgcatcggcctggtcgacgccctcatccacccgcccggcctccgc
catgcggcgcggcgggcggcccgtgagctggcggcgggcacccgcaccgtcgagcgtgcc
gagcagtcgctcggggaccgcctgctggagggcaaccccgtcagtcggcgcgtcatctac
cggcaggcccgcacacggaccgagcgccgcacccggggcaactaccccgccccgccccgc
atcatcgacgcggtgcgcacggggatggaggagggcctggaggcggggctcgacacggag
cggcagcacttcggcgagctcgtgttcacgcccgagtcgcaggccctcgtgtcgatcttc
tttgccaagcgggacgcggagacgaacccgcagcccgaacaggcgcgcccggtcgacacc
gtgggcgtgctcggggcgggcctcatgggcagtggcatcgcgcaggtgtcggcccagaac
gggctcgacgtcgtgcttacggaccagtcactggcgctcgcggccgaggggaagaaggcc
atctggtccgcggtgaccgagcaggaggacaagggcatcatcaacacgtttacgcgagac
cagattgtagagcgggtcgcccccaccgccgactatgcgcccctccaggcggccgacgtc
gtgattgaagccgtgccggaggacctgtcgatcaagcacgcggtgctgtcggaggtagag
acggtcgtcgacgcggacacggtgctggcctccaacacctccgccctccccatctcgacg
atcgccgagggcgtggacgacccgtcccgcgtgctcgggatgcactacttctcccccgtc
cccgacatcccactgctggagatcgtcgtcaccgaggagacctccgacgaggcactggcc
accgcctacgccgccggcctcgcgcaggacaagaccgtcatcgtggtgaacgacggcccg
ggcttttacaccactcgcatcctcgccctctacatgaacgaggccctgctgctcttcgag
gccggggccgagatcgaggcggtcgacgaggcgatgatggacgccgggttcccgatgggc
ccgttcgagctgttcgacctggtgggcctggacgtggcggccaaaattacggacgtgatg
ggcgaggccctctcgccggaacgcgtcgacatcagcgaccgggccggccggctcgcggag
gccgacctgctgggccaaaagaccaaccgcggcttctacgagtacgacgcggacgacgac
gccgacgacaaggacccgcagggcgtcaacgacgccgtgtaccggcaccgcgatgcctcg
tcccgatcgaccccgcccgccggcgcgatccaggaccgcctgcttctcatgatggtcaac
gaggccgtccggtgcctcgaagacgaggtgctccgcgcccccatcgacggcgacctcggg
gccgtgtttgggctcggctttccgccgttcctcggcgggcccttccgccatgccgaccgt
gcaggggccgcctccatcgtggacaccctccagcgcctggccgatcggcacggccctcgc
tttgccccggccgaccgcctccagacccacgccgctcaggacaccacctttcactcgtaa
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