Sinocyclocheilus rhinocerous: 107712581
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Entry
107712581 CDS
T04916
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107712581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107712581
03036 Chromosome and associated proteins [BR:
srx03036
]
107712581
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107712581
Coactivators
SAGA/TFTC/STAGA complex
107712581
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107712581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
107712581
NCBI-ProteinID:
XP_016373377
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MPNPSSSLYQMTIPSSQWGDSMQMLQSPVWSTANDCPPSSGISSGFPFTQQQQQQQQQQQ
QQQQQQQTGGTAQLPAPVDSPSEPQQQAQQQQQQQQNARKAARNPDSDPKDASMDKHAKA
LEKESPLKSHGSIIIITTAAAAAASDAPAPGNKGESPRDTRKKHLGKSRTLRSAASHSLN
GNGGDAASASSPSTSSTTFSVSSNPQAISLDRGTPTIALHRLPRHIIASIAQNGNGTSVS
ELVQQGARINHSKTPADNNAKPAATSATAAPVKPTVIRPAQTQPQPPAQQRVVTPQLIVR
PPQQQTTIQLPPGFTIPPGMVLVRTEMGQLVMVPQQALAQAQAQNSISPRPSTPTSVATF
RVTTPQSPVSTQAIRPAPAAQTKLVQFSSPSASAQTSTAAGPAKAPMAAAVAVTAPQQVQ
PALGPQGPLTQMPLAPQSAAAPAPGASLVSQEMQENVKKCKNFLATLIKLASHNSPSPET
SRNVKALVQDLLDAKIDPEEFTSRLQSELKSSPQPYLVPFLKKSLPALRVSLLNSQQTFT
QPLQPNKTSVTPVQTGVSVRPHQPNSTTVLPQGIKRAVGPGGQIRMPVVITQTVRATGAL
GKPAAIQTGKSPAGVTIQLSGNQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARIL
ATSSDLVGTQIRSCKDEAFLSTGLLHRRILETAKRFGVTDVPLEAVNFISHATQSRLRTV
LEKVSSIAQNRMDSSKEDEWFEQSSDVRSQLKFFEQLERMEKQRKDEREREILLRAAKSR
SRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGATTTGTEVS
GSSAGSPGGSSAPSSSSRQYNRQRITRVNLRDFIFYMEQERKTSRSLLLYRALLK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatcccagctcttccctctaccagatgaccatcccctccagccaatggggcgat
tccatgcaaatgctgcagtctccggtgtggtcgacggccaatgactgccctccatcctcc
gggatctcctccggcttcccgttcacacaacaacaacagcagcagcagcagcagcagcag
cagcagcagcagcagcagcagacaggaggaacagcgcagctgcctgctcctgtagactct
ccatcagaaccacaacaacaagcgcagcagcagcagcagcagcagcagaacgcgcggaaa
gcggcgcgcaacccggattctgacccgaaagacgccagcatggataagcacgccaaagct
ctggagaaggagagccctctgaagtcgcatggcagcatcatcatcatcactacagcagca
gcagcagcagcatccgacgctcctgcaccgggcaacaaaggtgagagcccgagggacacc
cgcaagaaacacctggggaagtcgcgcacgctgcgctccgcagcatcccacagtctcaac
ggcaacggaggcgacgcagcatcagcatcatcacccagcacctccagcacgactttctcc
gtgtccagtaacccgcaggcgatctcgctggaccgcgggacgcccaccatcgcgctgcac
cgactcccgcgtcacatcatcgccagcatcgcgcagaatggaaacggcacgtcggtgtcc
gagttggtccagcagggcgcgcggatcaaccacagcaaaacacccgcggacaacaacgcg
aagccagcggcgacctcggccacagcagcgcctgtcaaacccacggtcatcagacctgcg
cagacgcagccgcagccgcctgcgcagcagagggtcgtaacgccgcagctgattgtcaga
ccaccgcaacagcaaactactatacagctgccgcccggattcaccatcccaccaggtatg
gtgctggtccggacagagatgggtcagctggtgatggttcctcagcaggctctggctcaa
gctcaggcccagaacagcatctcgccgcggccctccacacccaccagcgtggccacgttc
agggtcacgaccccacagtctcctgttagcactcaggcgattcgtcccgctcctgcggct
caaactaaactggtccagtttagttcaccgagcgcttcggcccagaccagcaccgcagcc
ggccccgctaaggcccccatggcagccgccgtggcagtgacagctccccagcaggtccag
ccggccttgggcccccaggggcccctcactcagatgccactggccccgcagagcgcagcc
gccccagcccccggagcttcgcttgtctcccaggagatgcaggagaacgtgaagaagtgc
aagaacttcttggcgacgttgatcaagttggcgtcccataattccccttccccagagacg
tctcgaaacgtgaaagcgctggtgcaggatttactggacgcgaagatcgatccggaggag
ttcaccagccgcctacagtccgagctgaagtcgtctccgcagccgtacctggtccctttc
ctgaagaaaagtctccctgcgttgcgtgtgtctctcctgaacagccagcagactttcact
cagcctctgcagcccaacaaaaccagcgtgacgccggtccagacgggtgtcagtgtgcgt
ccgcaccagcccaacagcaccaccgtactgccacaaggtatcaagagggcagtgggtcct
ggaggtcagatacggatgcctgtggtcataacacagacggtgcgagcgacaggtgcttta
gggaagcctgcggcgatccagacgggcaaaagccctgcgggcgtcaccatacagctctca
ggaaaccagaaaaacaagctgaatgacccggggggaggctccttcagagacgatgatgac
atcaacgatgttgcatctatggctggtgtgaacctcaacgaggagagcgcgcgcattcta
gcgaccagctctgatctggtgggaacgcagatccgctcctgtaaagacgaggccttcctg
tctacaggtctgttacaccggcgtatactggaaacagcgaagaggtttggagtgacggac
gtaccgctggaggctgtgaacttcatctctcacgccacccagtccagattacggacggtg
ctggagaaagtttcctccattgcccagaaccgaatggactcgagtaaggaagacgagtgg
ttcgagcagtcatctgatgtgcgctcgcaactcaagttttttgagcagttggaacgaatg
gaaaagcagaggaaagatgagcgagaacgagagattctcctcagagcggcgaagagtcgc
tcgcggcaagaagatccagaacaagcccgtctgaagcagaaagcaaaggagatgcagcag
caggaactcgcccaaatgagacaacgagacgccaacctgacggcactcgccgccattggc
cctcggaaaaaacgcaaagtggactcgccaggagcaacaacgacaggcactgaggtgtcg
gggagttcggcaggttctccaggcggatcgtcggccccgtccagctcgtcgcggcagtat
aaccgccagagaataacacgcgtcaacctcagggacttcatcttctacatggagcaggag
agaaagaccagcagatctctcttactgtaccgcgctctcctgaagtag
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