Sinocyclocheilus rhinocerous: 107713565
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Entry
107713565 CDS
T04916
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03250
Viral life cycle - HIV-1
srx04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107713565 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107713565 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srx03400
]
107713565 (samhd1)
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107713565 (samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
107713565
NCBI-ProteinID:
XP_016374600
UniProt:
A0A673HJ57
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MERGIKRPREEADGVLREKQGCDADFRRWDVAETVLYLRREGLEQWEQMFREHGITGPGL
PFLTEAHLEKMGVFPLGSRLHILHCLQKLWQVSNESMKVLNDPIHGHIELHPLLLRFIDT
PQFQRLRHIKQLGGTYLVFPGASHNRFEHSVGVGYLAGCLVQALNERQPELLITKQDVLC
VQIAGLCHDLGHGPFSHLFDGMFIPKVRPGEKWKHEMASVQMFDHLVRVNGLEEVMERHG
LTLPDDLVFIKEQIAGPLDNSVFNSSWPYKGRPMEKSFLYEIVANKRNGIDVDKWDYFAR
DCYHLGIQNNFDYQRFLKFARVCEVKGKKHICTRDKEVGNLYDMFHTRNCLHRRAYQHKV
GNIIETMITEAFVKADPHIQIQGSSGRIFSISSAIDDMEAYTKLTDHIFELILYSSAPEL
SEARAILHNIVCRRLYKCVGQTTAETHLDASPEKLLDWAKEVAGSKPSGTDANLTAEDFV
VRVIHMDYGMKEKNPINNVHFYCKKDPTKAIKIRKKQVSKLLPERFAEQLIRVYCKKTDD
KSLEAAKKYFVQWCMDRNFTKPQDGDIIAPELTPLKRDWHTLERDDDDSELDDSAEDNHL
GLRDEPPRKTGRNVKVNLFHAPGESRL
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaggaattaaacggccacgagaagaagcagacggtgttctgcgtgagaagcag
ggttgtgatgcggacttcaggcgctgggacgtggccgaaacggtcttatatctgcgcaga
gaaggactcgagcagtgggagcagatgttcagagaacatggcataacagggccaggcctg
ccgttcctcaccgaagcgcatttggagaagatgggtgttttccctctgggatcacgcctg
cacatcctccactgcctgcagaaactctggcaagtctccaatgagtccatgaaggtgttg
aacgacccgatccacggccacatcgagctgcaccctctgctgctgcgcttcatagacact
cctcagttccagcggctgcgccacatcaagcagctgggagggacttacctggtgttcccc
ggggcttctcacaaccgcttcgagcactccgtcggggtgggatatttggccggatgtcta
gtgcaggctctcaatgaaagacagccggagctcctcataacaaagcaagatgttctgtgt
gtgcagattgctggcctgtgccatgacttgggtcatggcccgttttctcatttgtttgat
ggcatgttcatccctaaagttcgacctggagagaaatggaagcacgagatggcctcggtt
cagatgtttgaccacttggtgagagtgaacggtctggaggaggtcatggagcgccatggg
ctgactcttcctgacgacctggtgttcattaaggagcagatcgccgggccgctggataac
tccgtcttcaacagctcgtggccatataagggcaggccgatggagaaatcgttcctgtat
gagatagtagcaaacaaaagaaacggcatagatgtggataagtgggattattttgctcgt
gattgctatcatctcggcattcagaacaacttcgactaccagcgtttcctcaaatttgca
cgagtgtgtgaagtgaaaggaaagaagcacatctgcaccagagacaaggaagttggcaat
ctctacgacatgttccacactcgcaactgcctccatcgccgggcgtatcagcacaaagtg
ggcaacatcatcgagaccatgataacggaggcttttgtaaaggctgatcctcatattcag
atccagggctcttctgggaggatcttcagcatctcttcagctatagacgacatggaggcc
tacaccaaactcacagatcacatatttgagctgattctgtactcgtctgcgccggagctg
tctgaggcacgagccatcctgcacaacatcgtctgcagacggctgtacaagtgtgtgggt
cagaccacagccgagacgcacctggacgcctcaccggagaagctgcttgactgggcaaag
gaggtcgccggttcaaagcccagcggcacagacgccaacctgacagcagaggactttgta
gttcgtgtcattcacatggattatggaatgaaggagaaaaaccccatcaacaatgtccac
ttctactgcaagaaagatcccaccaaagccatcaagatccgcaaaaaacaggtgtccaaa
ctgctgccggagcgcttcgccgagcagctgatcagggtttactgtaagaagacggatgac
aagagcctagaagctgctaagaagtacttcgtccagtggtgcatggacaggaacttcacc
aaacctcaggatggagatataattgctccagagctcaccccactcaaacgtgactggcac
acgctggagcgagacgacgatgacagcgagctcgatgacagcgctgaagacaatcatctc
ggactgagagatgaaccgcccaggaagactggacgtaatgtgaaagtcaacctctttcat
gctccgggagaaagcagactctga
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