Sinocyclocheilus rhinocerous: 107729198
Help
Entry
107729198 CDS
T04916
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
107729198
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
srx04054
]
107729198
Enzymes [BR:
srx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107729198
Pattern recognition receptors [BR:
srx04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
107729198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_22
Hydantoinase_B
DUF5740
Motif
Other DBs
NCBI-GeneID:
107729198
NCBI-ProteinID:
XP_016395114
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MAAQMDFNLRPYQEEVVQAALRGENSIIWLPTGGGKTRAAVYVTHNHLETTANAKVAVLV
NKVHLVDQHFAKEFKPYLESRYKITAISGDSNEKDLFGRLVKASDLVICTAQILENALIN
TEEEKHVELTDFTLLVIDECHHTQKESVYNKIMGRYVEKKLRKEGNLPQILGLTASPGTG
GNRKLDKAVEHVLQICANLDSVIVSTKNFTPVLQKVVPRPKKHYDIVERRALDPFGDHLK
SMMSMIHEFMPSTVSRSLREMGTQEYETDVVELEKTGVKKENRLIAQCALHLRQYNDSLL
INDTVRMVDAFRGLDEFYNSRKTKLLDGTDIFLQGLFDENRMELKLLASNDRYENPKLAR
LQRTLLDEFSDKNSCGILFSKTRRGTHCLYDWVNSNSELLKVNIKAGILTGAGTGANHMT
QNGQKETIQQFRDGILNLLISTSVAEEGLDIPECNLVVRYGLLTNEIAQQQASGRARAMN
SVYSVVAEEGGRELRRELINEYLESLTAKAIDQVQQMSPREFRHKISELQQIAVLIRIQA
ERKKDERKQRYSPGQAQFQCRECFLPVCSGEDLRKIENTHHVNINPEFVRHYRTGGQVSL
ERNFEDWEPGRVISCNKCGKDWGMEIRFRNVVILPCLKIKSFSLKTPGGKSTPKQWKDVE
FQVKEFDFLEDMSSRFPDLDLDD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacagatggacttcaaccttagaccgtaccaggaagaggtggtgcaggcagcg
ctcagaggggagaacagcatcatctggctgcccaccggtggaggaaaaacccgtgctgcg
gtttatgtcactcataaccacctggagaccacagccaatgccaaagtggcagtgctcgtc
aacaaggtgcatctagttgaccagcacttcgcaaaagaattcaagccttatcttgagagt
agatacaagataacagccatcagtggggacagtaatgagaaagacttgtttgggcgtcta
gtcaaggcctcagacctggtcatctgcacggctcagatcttggagaatgccctgattaac
acggaggaggaaaaacacgtggagctgactgactttaccctgctggtaatagacgaatgt
caccatacacaaaaggagagtgtctataataagattatgggccgctatgttgaaaagaaa
ttgagaaaagaagggaatctgcctcagattttgggcctcactgcatcacctggtacagga
ggaaataggaaactggataaagctgttgaacatgtactgcagatctgtgccaatctggac
tcagtaattgtgtccaccaagaattttacaccagtgctgcagaaagtcgtccccagaccc
aaaaagcattatgacattgttgaaagaagagctctggatccatttggcgaccacttgaag
tcaatgatgtcgatgattcatgagtttatgccgtcaacggtgagtcgcagcctgcgagag
atgggcacccaggaatatgaaactgacgtggtggaactagaaaaaacaggtgtaaagaag
gagaacagactgattgctcagtgtgctttgcacctgcggcaatacaacgactctcttctc
attaatgacaccgttcgcatggtggacgcgttccggggtctagacgagttctacaattca
cggaaaaccaaattgttggatgggacagacatctttctccagggactttttgatgagaac
cgcatggagcttaaactgctggcatcgaatgaccgctacgaaaaccccaaactggcccgt
ttgcaacgcacattgctggatgagtttagtgacaaaaactcttgtggtatcctcttctca
aagacccgcaggggcacccattgtctttatgactgggtgaactccaactctgagctgctg
aaggtcaacatcaaagctggcattctcactggagcgggtacaggtgcaaatcacatgacc
cagaatggacagaaggaaaccatacaacagtttagagatggaatcctcaacctcctcatc
tccaccagtgtagctgaggaaggacttgatattccagaatgcaacttagttgtacgttac
gggctgttgaccaatgagattgctcagcagcaggccagtgggcgggctcgagctatgaac
agcgtctattcagtggtggctgaagaaggtgggcgtgaactacgcagggaacttatcaat
gagtatctagaaagtctgactgcaaaagctattgaccaagtgcagcaaatgagtcccaga
gagtttagacacaagatatccgagctccaacaaatcgctgttctgattcgaatccaggcc
gagaggaaaaaggatgagaggaagcaacgctatagtcctggtcaggctcagtttcaatgc
agagaatgcttcttgcctgtctgcagtggagaagatttaagaaaaatagaaaatacacac
catgtcaacatcaaccctgagtttgtgaggcattatagaacaggtgggcaggtctctctg
gagaggaactttgaagattgggagcctggacgggttatcagctgcaacaaatgtggaaag
gactggggaatggagattaggttcaggaatgtggtaatactcccctgcttaaaaataaaa
agcttttccttgaagactcctggaggcaaatccactcccaagcagtggaaggatgttgag
ttccaggtgaaagagttcgactttcttgaggacatgagcagccgtttccctgacctagac
ttagatgactga
DBGET
integrated database retrieval system
