Sinocyclocheilus rhinocerous: 107738304
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Entry
107738304 CDS
T04916
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 homolog
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107738304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
srx04131
]
107738304
Membrane trafficking [BR:
srx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107738304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_2
Vps39_1
CNH
Clathrin
Motif
Other DBs
NCBI-GeneID:
107738304
NCBI-ProteinID:
XP_016405510
UniProt:
A0A673MA34
LinkDB
All DBs
Position
Unknown
AA seq
867 aa
AA seq
DB search
MSVKAFELVPAVEREQVMGEKVRINIECIECCGVHLYLGTNDCFIHHFLLEERTTSKGKL
AYNAQKLLHKYLGLKKPVAELKAASALERLIVLCDSTITVVDMVTLEPVPTGGTKLKGVT
AFCINENPVTGDAFCVEMAVVLARRRAVQICTVHEDRVQMLKEVTTPEQPCALSLDGYNI
CLALSTQYMILNYSTGASQDLFPYDCEERKPIVKRIGREEFLLAAPGGLGMFANAEGISQ
RAPVSWSESVIAAAVCFPYVVALDEGFVTVHSMLDQQLKQTLSFRDGHLLQDFEGKVVLA
SSKAVYILVPLPLEHQIQDLLASHRVEEALTLTEAAQRNIPKEKYQTLHKRILQQAGFIQ
FGQLQFLEAKEHFRKGQLDVRELISLYPLLLPASSSFTRCHPPLHEFADLNHLTQGDQEK
VQRFKRFLFSYLHEVRSSDSANGFREDVDTALLKLYAETGHESLLDLLASDNACLLADSA
PWLEKHHKYFALGLLYHYNGQDSAALQMWVKIVSGDLQDSTRPDLFEYVVDFLSFCSNLD
LVWRHAAWALQKDQKIGVQIFTKRPTSEEKTGQLNPDDVITYLQKHSQALLLYLEHLVLE
KRLQEEKYHTHLAVLYADRVLGLISRPSATDDQLSAARQKLQRLLKESNLYRVQLLLSKI
QDSGMLLLERATLHGKLEEHDKALHILVHQLKDSAAAEEYCSWASASHDQSYRQNLFHQL
LSVYLDPDVPGGAQTVAAVDLLNRHAEVFDAVRVLKLLPEEWSLPLLRPFLCGALRASVH
ARCTSQIAVGLARTQNLQLQHDRLKYRGGPILVSEKKGCQLCHNTFSEPDCACLPGGTPV
HIHCVAKKALNLPVEHQHENAHRSNHT
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaaagcttttgagctggttcccgccgtggagcgggaacaagtgatgggcgaa
aaggtgcggataaacattgaatgcatcgagtgctgcggcgtacatctgtaccttggcacc
aatgactgcttcatccatcacttcctactagaagagcgcactacatccaaaggtaagctg
gcctacaatgcccagaagctcctccacaaatacctgggcctgaagaagccagtggcagag
ctgaaggctgcctctgctttagaacgtctaatcgtcctctgtgactcaaccatcactgtt
gtggacatggttactctggagcctgtgcccaccgggggcacaaagctcaaaggtgtgact
gcgttttgcatcaacgagaatccagtgacgggggacgcgttctgtgtggaaatggcggtg
gttttggcacgcagacgggccgtccagatctgtacggtccatgaggacagagtgcagatg
ttaaaggaagtgaccacaccagagcagccctgtgccctgagcctggacggatacaatatc
tgtctagctctgtccacgcagtatatgattctcaactacagcacaggagcctctcaggac
ctgttcccttacgactgtgaagaaaggaaacccattgttaagaggattggccgggaagag
tttctcctggctgctccaggcgggcttgggatgtttgctaacgcagagggcatatctcag
cgtgctccggtgagctggtcagagagcgtgattgcggcggctgtgtgtttcccatatgtg
gtcgcactggatgaaggctttgtgacagttcacagcatgttggaccagcagctcaaacag
actctgtcattcagagatggacaccttctacaggattttgaaggtaaggtggtgttggcc
tcttcaaaagcggtgtatatactggttcctctccctctggagcatcagatccaagacctg
ttggcaagccatcgagttgaagaggccctgaccctcaccgaggcagcccagagaaacatt
cccaaagaaaaatatcagacattgcacaaaagaattctccaacaagcaggattcatccaa
tttggccagcttcagtttttagaagcaaaagaacattttaggaaaggacagctggatgta
cgggagctgatctctctttatcctctgctccttcccgcctcttcctcgttcacacgttgc
catccaccacttcatgaatttgctgacttgaaccacctgacgcaaggggaccaggagaag
gtacagcgcttcaaacgtttcctctttagctacctgcacgaggtgcgcagcagcgacagt
gctaatggtttccgtgaagacgtagatacggcattgctgaagctctacgcagagaccggc
catgagagtcttctggatttgctagcctccgataacgcctgtctcctggcagacagcgcc
ccctggctggagaagcatcacaagtattttgctcttgggcttctatatcactacaatggt
caagattctgcagctttacagatgtgggtgaagatcgtcagcggagatctccaggactca
acacgaccagatctgtttgaatatgttgtagattttcttagtttttgctccaaccttgat
cttgtgtggcggcatgcagcctgggcactacagaaggatcaaaagattggtgtccagatc
ttcaccaaacggcctacctcagaggagaagacgggccagttaaacccagatgacgtaatc
acgtatttgcagaagcacagtcaagcccttctgctctacctggagcaccttgttcttgag
aagagattgcaggaagagaagtatcacacacatctggctgtgctgtatgcagacagagtg
ctgggtctgatctcacgaccatcagccactgatgaccagctgtctgctgcccgccagaaa
ctacaacggttactgaaagagtctaatctgtacagggtccagttactattaagtaaaatt
caggactccgggatgctgctgcttgagcgagctacactacatgggaagttagaggaacat
gacaaggccttgcacattctagtgcaccagctcaaagactcggctgcagctgaggaatac
tgctcttgggcctctgcgtctcatgaccagtcctaccgtcagaaccttttccaccaactc
ttgagtgtttacttggacccggatgtaccgggaggggcacaaacagtagctgccgttgac
ttgcttaaccggcacgctgaagtttttgatgcagtgcgtgtgttaaagctgctcccagaa
gagtggtctctaccgttactccgtcctttcctgtgcggggcgctgagggccagtgtgcat
gcacggtgcacttcccagattgcagtggggctggccagaacacaaaacctccagcttcag
catgacaggctaaagtatcgaggcggcccaatattagtgtctgaaaagaaaggatgccag
ctgtgccacaatacctttagcgagccagactgcgcctgcttgcccggcggaacacctgtt
cacattcactgtgtcgccaagaaagccctgaacttaccagtagagcaccaacacgaaaat
gcccaccgcagcaaccacacatga
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