Sinocyclocheilus rhinocerous: 107738735
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Entry
107738735 CDS
T04916
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107738735 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107738735 (sf3b3)
03041 Spliceosome [BR:
srx03041
]
107738735 (sf3b3)
03036 Chromosome and associated proteins [BR:
srx03036
]
107738735 (sf3b3)
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
107738735 (sf3b3)
Spliceosome [BR:
srx03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
107738735 (sf3b3)
Complex B
107738735 (sf3b3)
Complex C
U2 SnRNP specific factors
107738735 (sf3b3)
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
107738735 (sf3b3)
TFTC complex
107738735 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
107738735
NCBI-ProteinID:
XP_016406045
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISHAIHGNFSGTKLQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG
VIRSLMAFRLTGGTKDYVVIGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRALMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVSTAMCVLKTGFLLVATEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMSCQIADLANEDT
PQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQAQDAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAIFNQVAFP
LQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGSGQWASLVRMINPIQGNTLDLVQLEQNEAAFSVAVCRFSNGG
DDWYVLVGVARDMILNPRSVGGGYIYTYRLVGGGDKLEFLHKTPVEDVPLAIAPFQGRVL
VGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQ
LIIFADDTYPRWVTTACLLDYDTMAAADKFGNICIVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEVIINYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEIHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacctgaccctgcagcgggcaactggcatctcccatgccatccatggc
aacttctcaggaactaagctgcaggagattgttgtttcccgtgggaaaattctggaactg
ctgcgtcctgatgccaacacggggaaggtccacacgctgcttactatggaggtttttggt
gttatccgatccctcatggctttcaggttgacaggtggaactaaagactatgttgtgatt
ggaagtgactctggccgaattgtgatcttggagtaccatccttccaaaaacatgtttgaa
aagatacaccaggagacattcggcaagagcggctgcagacgtatcgtgccagggcagttc
ctcgctgtggacccaaagggcagagctcttatgataggtgccatagagaagcagaagttg
gtatacatcctgaacagagatgcagctgcccgccttaccatctcctcccctctagaggcc
cacaaggctaatacacttgtttaccatgtggttggtgtggatgtggggtttgagaaccct
atgtttgcctgcctggagatggactatgaggaggccgataatgatcccaccggagaggct
gcagcaaacacacagcagactctgaccttctatgagttggacttgggcctcaaccatgtg
gtgcgcaagtacagcgaggcactggaggaacacggcaacttcctcatcacagttcctggt
ggttcggatggtcccagtggtgtgctcatttgctctgagaactatatcacctacaaaaac
tttggagaccaaccagacatccgttgcccaatcccacgcagaaggaatgacctggatgat
cctgagcgaggcatgatctttgtctgctctgccacccacaagaccaaatccatgtttttc
tttctagcccagacagaacagggagacatctttaaagttactctggaaactgatgaggag
atggttactgagatcaggatgaagtattttgataccatcccagtgtctacagccatgtgt
gttttgaagactggcttcttacttgttgctacagagtttggaaatcactacctgtatcag
attgcccacttgggtgatgacgacgacgaaccagagttttcctctgccatgcctttggag
gagggagacacattctttttccaacctcgcccccttaagaaccttgtgttggtcgacgag
caagaaaatctttctcccatcatgtcctgccagattgctgatttggctaatgaagacacc
ccgcagctatatgtggcgtgtggcagaggacccagatctacactgagagttttgagacat
ggactggaggtttcagaaatggctgtctctgaactgcccggtaaccccaatgctgtgtgg
actgtcaggagacatgtagaagatgagtttgatgcctacatcattgtgtccttcgttaac
gctaccctggtgctttctatcggtgagactgtggaagaagtgacagactctggtttcttg
ggcacaacacccaccctgtcatgctcgttgcttggggaagatgcacttgtgcaagtctac
ccagatgggatccgtcatatccgtgcagataagagagtgaatgaatggaagactccaggg
aagaagacgattgtccgatgtgctgtcaatcagaggcaggtggtcattgctttgactgga
ggagaactggtctactttgagatggacccgtctgggcagctgaatgaatacactgagagg
aaggagatgtcggcagatgtggtgtgcatgagtttggcaaatgtgcctcctggtgaacag
cgttcacgtttcctggctgttgggttggtggacaatacagtccgcatcatctccctggat
ccatcggactgtctacagccattgagtatgcaggctcttcccgcccagccagagtcactt
tgtattgtggagatgggtggagtggaaaaacaggatgagcttggagaaaagggcaccatt
ggctttctatacctcaacattggcttgcagaacggagtgttactgcgtactgttttggat
ccagtgaccggggacctgtctgatactcgaactcggtatcttggttctcgtcccgtcaag
cttttcagagtccggatgcaggcccaagatgctgttctggccatgtctagtcgttcctgg
ctgagttactcataccagtctcgtttccacctgaccccattgtcatatgaaaccttagag
tatgcttcagggtttgcttccgaacagtgtcctgagggtattgttgccatttccaccaac
acactgaggattttggctcttgagaaactgggtgccatcttcaaccaggtggcattccca
ctgcagtacacacctcgcaagtttgtcatccacccagagacgaataacctgatcctgatc
gaaacggaccacaatgcctacactgaagccaccaaagcccagcgtaagcagcagatggct
gaggaaatggtggaggcagcgggagaggatgaaagggagctggctgcagaaatggcagca
gctttcttgaacgagaacctgccagaagcgatctttggggcacctaaagcaggctctggg
cagtgggcctcactagtgcgcatgatcaaccccatccaaggaaacacactggacctggtg
cagctggagcagaacgaggctgctttcagtgtggctgtatgtcgattttccaatggaggc
gatgattggtacgtgttggtgggtgttgccagagatatgatactaaatcctcgctccgtt
ggtgggggttatatttatacctatcggctagttggaggtggggacaagctggagttttta
cacaagacgcccgtggaggacgtacccctggctattgctccatttcagggacgagtgttg
gttggagtgggcaaactcttgcgcatctatgacttgggaaagaagaaacttcttcgcaag
tgtgaaaacaagcatgttcctaacttggtaacgggcatccacactattgggcagcgcgtg
atagtatccgatgttcaggaaagtctattctgggtacgctacagacgcaacgagaaccag
ctcatcatctttgccgacgatacatatcctcgctgggtcacaaccgcctgcctgcttgat
tatgacaccatggctgctgcggataagtttggaaatatctgcattgtccgcctgcctccc
aacaccagcgatgatgttgatgaggaccccacagggaacaaagcattgtgggacagaggc
ttgcttaacggagcatcacaaaaggccgaggtgattattaactatcacataggagagacg
gttctgtccctccagaaaactaccctcatccctggaggatcagagtccctggtgtacacc
acactatcgggaggcattggcatcctggtgccgttcacctctcatgaggatcatgacttc
ttccagcacttggagattcacatgcgctctgagtttccccctctgtgtggtcgtgatcac
ctcagcttccgctcgtactattttccagtaaagaatgtgatcgatggagacctttgtgag
cagtttaactccatggacccacataagcagaagagtgtctctgaggaattggaccgcacg
cctccagaggtgtcgaagaaactggaagacatccgaacacgctatgccttctag
DBGET
integrated database retrieval system
