Sinocyclocheilus rhinocerous: 107743106
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Entry
107743106 CDS
T04916
Name
(RefSeq) histone deacetylase 6-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
srx
Sinocyclocheilus rhinocerous
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
srx01009
]
107743106
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
srx03019
]
107743106
04131 Membrane trafficking [BR:
srx04131
]
107743106
03036 Chromosome and associated proteins [BR:
srx03036
]
107743106
Enzymes [BR:
srx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107743106
Protein phosphatases and associated proteins [BR:
srx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107743106
Messenger RNA biogenesis [BR:
srx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107743106
Membrane trafficking [BR:
srx04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107743106
Chromosome and associated proteins [BR:
srx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107743106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
DUF6377
Motif
Other DBs
NCBI-GeneID:
107743106
NCBI-ProteinID:
XP_016411706
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MDPVPGSKRSTRSPRGAPETKRENNNPNHKKNLQEARRKGRMDRSKEEEEMSNELQNLDV
RGKTKATGTGLVYVDAFTRFHCLWDASHPECPARVSTVMEMLETEGLLGRCVRVEARAVS
EDELLLVHTKEYAELMKSTQKMSEEELKTLADKYDSVFLHPEFFTSACLAVGSVLQLVDK
VMTSQLRNGFSINRPPGHHAHADKMNGCCMFNHLAIAARYAQKQHGVKRVLIVDWDVHHG
QGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGLGAGQGYNINLPWNKIGMEDG
DYITAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDPMGEMRVSPQCFSILTHMLKGVAQGR
LVLALEGGYNLQSTAEGVCASVRSLLGDPCPHLVSPGAPSESALKSISKTISALYPFWKS
LQTFEGGPLSDVPPLPAPVCAEVKASSLITGLVYDQRMMLHHNMWDGHHPELPQRISRIF
CQHEELGLLSRCLRIPARLATEEELALCHSSEHISTIKSTEHMKPRDLHRLGNGYNSIYI
SNESYTCALMAAGSCFNSVQAILTGQVRNGVAIVRPPGHHAEKDTACGFCFFNTAALTAR
YAQCTTHESLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGTFFPSSEDANYDKV
GQGKGRGYNVNIPWSGGKMGDPEYLAAFHHIVMPIAREFAPELVLVSAGFDAARGDPLGG
YQVTPEGYAHLTHQLMSLAAGRVLVILEGGYNLTSISESMSMCTSMLLGDSPPPLDHLPP
PKTNATVTINNVLRAFSPFWSSLRIQIPESLRLALPSPKPKGKRASAGKGKKSPRQSTPA
QSPGQTPQHLEQSGLDELSKDLLSLNLNTSTSSNPSPASVPIGGARRKVKPTAQRNSADR
ESDSPLKLKSEKTRAGDDTHAEITTDRTIQESVVTGNSAAVDDQENSVLEAAGGQATMMS
VLESVFGAQATDLDTMYAVDPLPWCPHLESVRPVPAGGIDVFLPCEECGGDTENWICLFC
YKVLCGRYVKQHMVTHGQESGHPMVLSFADLSVWCYACESYVHNKVLHEAKNTAHLVKFG
EEIPPFN
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgttccaggttccaaacgttctactcgatcaccaagaggagcaccagaaacc
aaaagagaaaacaacaatccaaaccataagaagaatctacaggaggcgcggaggaagggc
agaatggatcggagcaaagaggaggaggagatgagcaatgagctccaaaacttggatgtt
cgtggtaagactaaagcaacaggaacaggtctcgtctacgtagacgcctttactcgtttt
cactgcctctgggatgccagtcacccagagtgtccagcgagagtgagcactgtgatggag
atgctggagacggaaggtctgctgggacgctgcgtacgagtagaggccagagctgtgtca
gaagatgagcttttactcgttcatacgaaggagtatgcagagctgatgaaatccactcag
aaaatgtcagaggaggagctaaagactctggctgataaatatgactctgtcttcctgcac
cctgaatttttcacctctgcctgtctggcagtgggatcggttctccagctggtggataag
gtgatgacatcacagctgcgtaacggcttctccatcaacaggcctcctggtcaccacgct
catgcagataagatgaacggctgctgtatgtttaaccatctggccatagcagcgcgctac
gctcagaaacagcatggagttaaacgagttctaattgtggattgggatgtgcatcacgga
cagggaatccaatatatttttgaagaggatcccagtgtgctgtatttctcagtgcacaga
tatgaagacggctcgttctggccgcacctcaaggagtctgacagcagttcggtgggttta
ggagcaggacagggctacaatatcaacctgccctggaacaagatagggatggaggatgga
gattacatcacagctttccagcagctactcctgcctgtggcgtatgagttccagcctcag
ctggtgttagtggcggccggatttgactctgtgatcggtgacccaatgggtgagatgcga
gtgagtccacagtgcttctccatcctgacccacatgctgaaaggtgtagcacagggacga
cttgtgctggctcttgagggtggatataacctccagtccacagcagagggtgtttgtgct
agtgtgaggtcactgctgggtgacccttgccctcatctggtctctcctggtgctccgagt
gaaagtgccctgaagtccatctcaaagaccatctcagccttgtatccattttggaagagt
cttcagacgtttgagggtggtcctctgtccgatgtccctcctctgcccgctccagtgtgt
gcagaagtgaaggcttcctctctgatcactggactagtttacgaccagagaatgatgctt
catcacaacatgtgggatggtcatcatccagagctccctcagagaatttcacgcatcttt
tgccagcatgaggagttgggtctgctgtctcgttgccttcggataccagctcgcctagca
acagaagaagagctggcactctgtcacagttctgagcacataagcactataaagagtaca
gagcacatgaagcccagagatctgcacagactgggaaacggttacaactccatctacatc
agtaatgagagctacacctgcgccctgatggccgctggctcgtgttttaactccgtacag
gccattctcacaggccaggtgagaaacggcgtggccatagtccgtcctcctggtcatcat
gcagagaaagacacagcttgtggtttctgtttctttaatacggccgctttgaccgcacgc
tatgcccagtgcaccactcacgagtccctgcgcgtccttatcctcgattgggatgttcat
catggaaacggcacacagcacatctttgaggaggatgacagtgttctgtacatctctctg
catcgctacgaagacgggacattcttccccagttcggaggatgcgaactatgataaggtg
gggcaagggaaaggcagaggatacaatgtcaacatcccctggagtggaggaaagatggga
gacccagaatacttggcggctttccatcacatagtgatgccgatagccagagagtttgcc
ccagagctggtgctggtgtctgctgggtttgatgcagcacgaggtgatccgttaggaggg
tatcaggtgaccccagagggctacgcccacctcacccatcagttaatgagcctggctgca
ggaagagtactagtcatactggagggaggatataacctcacctccatctctgagtcaatg
tccatgtgcaccagtatgttgctgggagactctcctccacctctagaccatctgccacct
ccaaagaccaatgccactgtcacgattaacaatgtcctgcgtgctttctcccccttctgg
agctccctgagaatacagattccagagtcacttcgtttggctttgccatctcctaaaccg
aaaggcaagcgggcatcggcgggcaagggcaagaaatctcctcgccagtccacccctgcc
caaagtcctggacagacaccgcagcatcttgagcagtccggccttgatgagctcagtaag
gacctgctctctctgaatctcaacacgagtacctcatctaaccccagcccagcttcagtc
cccatcggaggagccagacggaaggtgaaacccaccgcacagaggaattcagcagaccgg
gagtcagattcacccctaaaactcaagtcagagaaaaccagagctggagacgacacgcat
gcggagattacgacggaccggacgatccaagagtctgtggtcactggaaattcagctgcc
gtggatgaccaggagaactcagtgctggaggctgctggtggtcaagccactatgatgtca
gtcttagaaagtgtctttggagcacaagccacggatttggacaccatgtatgcggtggac
ccgttgccatggtgcccacacttggagtcagtgcgaccggtgcccgcaggtggcatcgat
gtcttcctgccgtgtgaagagtgtggaggtgatacagaaaactggatctgcctcttctgc
tacaaggtgctctgcgggcgttatgtgaagcagcacatggtgacccacgggcaggagtcg
ggtcaccctatggtgctgagcttcgctgacctctctgtctggtgctacgcttgtgagtca
tacgtccacaacaaggtgctccatgaagccaaaaataccgctcacctcgtgaagtttgga
gaggagattcctcctttcaactaa
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integrated database retrieval system
