Sinocyclocheilus rhinocerous: 107750324
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Entry
107750324 CDS
T04916
Name
(RefSeq) transcription elongation regulator 1-like isoform X1
KO
K12824
transcription elongation regulator 1
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107750324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
srx03041
]
107750324
Spliceosome [BR:
srx03041
]
Complex A
U1 snRNP components
U1 related factors
107750324
Complex B
107750324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
107750324
NCBI-ProteinID:
XP_016421149
UniProt:
A0A673J649
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MAEHTEGIGLAANSMAQQPALLFPAAAPPPANPSTRRQPLLSTPVPPFPMMRGPPPPARP
PFGRIPFDPSVPPPMGAPPLQRPPFMPPPGGSMPPPPGMIFPPGIPPTASPAPTPAPAPP
SLPSTEEIWVENKSPDGKVYYYNARTRASSWTKPEGVKVIQQAELGPVMLSQAVAAAAAI
GGSSGPGPSVSIPAAANSTTTTHTSQSPSMVMSSTSSPSITAASPLLPTPVSAHDVVEMP
SVVTTAPSAMATPIAAVNPPTVTVAMTTGPPPLPLALAHTVPQAAAPMPGFPPVMVSPFR
VPLPGMPIPLPGVAMMQIVSCPYVKTISPTKNGMLPGMAPPLVPMMPPQMAMAGPSGLPR
ALSTSDWTEFKTPEGKSYYYNKHTQETTWDKPEELKETEKESEKLKDAALDMIDAEIMEM
EDGSPKIDPPKEKKEELKEEEMTEEQKAAKKAKPVATTPIPGTPWCVVWTGDERVFFYNP
TTRLSMWERPEELVGRVDVDKAIQEPPHKRGLDNSNKLVLAKEEQEFAVAEDTPEDEPCK
AKRRKIEEKKEADTEKEAAMEAELKAARERAVVPQEARMSQFKDMLLERGVSAFSTWEKE
LHKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQVKDDFRKMMEEAKLGVR
TTFSEFAAKHARDSRFKAVEKMKDREAIFNEYMTAFRKKEKENSKNRGEKVKQDFFELLS
DYHVDGQQRWSKVKEKMETDPRYKAVETSAVREELFKEYVERLAKNPNSEKEKELEKQAR
IEASLRERERMVQRFRSEQTKEIDREREQHKREEAVQNFKALLSDMVKSSDANWSETRRT
LRKDHRWQSSSLLERDEKERLFNEHIEALGKKKKELFRQLLDETTSINLMTSWKEVKKLI
KEDPRCIKFSSSDRKRQREFGDYIKDKYITAKADFRTLLKETKFITYKSRKLMQESEQQL
SDIEKILQKDKRYLVLDCMSEERHKLLMAYVEELDRRGPPPPPTAFEPARRSTK
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcacacagaaggcattggcctggccgctaacagcatggctcagcagccagca
ctccttttccctgctgctgcccctccacccgccaacccctccacccgcaggcagccttta
ctgagcacccctgtgcctccatttcctatgatgaggggtcctccacctcctgcccggccg
cccttcggacgcattccctttgaccccagtgtgccccctcccatgggtgccccaccttta
cagagacccccgtttatgcctcctcctggaggatccatgccgcctccacctggcatgatt
ttccctccaggaataccccctacagcctctcctgctcctactcctgctcctgctcctcct
tccctgccctctacagaagagatctgggtggagaataagagccctgatggcaaggtgtat
tattacaatgcacgtacaagggcgtcatcctggacgaagcctgaaggagtgaaggtgatc
cagcaggctgagctgggtccagtgatgctgagccaggcagtggcagcagcagcagccatc
ggaggttccagcgggcctggtccatctgtcagcatcccagctgcagccaacagcactaca
accacacacacctcccagagcccctccatggtcatgagctccacctcctctcccagcatc
acagcagcctcacctctcctcccaacacctgtgtcagcccatgatgtcgtggagatgccg
tcagttgtaaccacagctcccagtgcaatggcaaccccaatagcagctgtcaatcctccg
acggttacagtggcaatgactacaggaccgccacctctgccgttggcattggcccatact
gtgccacaggccgctgctccaatgccaggtttccctcctgtcatggtgtcacccttcaga
gtgcccctgcctggcatgcccattccgctgcccggtgtagcaatgatgcagatagtcagc
tgtccctatgtaaagactatctctcctaccaaaaacggtatgctccctggcatggcacca
cctttggtacccatgatgcctcctcaaatggcaatggctgggccctcaggactgcctaga
gctctgagtacatctgactggactgagtttaaaaccccagagggaaagtcctactactac
aataaacacacacaggagaccacctgggacaaaccagaagaactcaaagagacagaaaaa
gagagtgagaaactcaaggatgcagctcttgacatgattgatgctgaaatcatggaaatg
gaagatggaagcccaaaaattgatccaccaaaagagaagaaagaggagctgaaagaggaa
gagatgacagaggaacagaaggcagcgaaaaaggcaaagcctgttgcaaccacacctatt
cctggcacaccatggtgtgtggtgtggacgggtgacgagcgagtgttcttttacaaccca
accacgcgtctgtccatgtgggagcggccggaggagctggtgggacgggttgatgttgat
aaagcgatccaggaacctccccacaaaagaggcctggacaacagcaacaaactggtgcta
gctaaagaggagcaggagtttgctgtagcagaagacacacctgaagatgaaccctgcaag
gccaagagacgaaagatagaggagaagaaggaggctgacacagagaaagaggcagctatg
gaggcagagctgaaggcggcacgtgagagagccgtggtacctcaggaagctcggatgagc
cagtttaaagacatgctgcttgagcgaggggtctctgcgttctctacctgggagaaggag
cttcataagattgtatttgatccacgttatctgctgctcaatcccaaagagagaaaacag
gtgttcgatcagtatgtgaagacacgtgctgaggaggagaggaaagagaaaaagaataaa
atcatgcaggtcaaagatgacttcaggaaaatgatggaggaagctaaactgggtgtcaga
acaacattcagtgagttcgctgccaaacacgccagggattcacgctttaaggctgttgaa
aagatgaaagacagagaagccatttttaacgaatacatgacggccttcagaaagaaggag
aaagagaactcaaagaatcgtggagaaaaggtcaagcaagacttttttgagctcctgtca
gattaccatgttgatggtcagcagcgctggagcaaagtgaaggaaaagatggagactgac
cctcgctacaaggctgtggaaacttctgcagttcgagaagaactatttaaggagtatgtg
gagcgtcttgccaagaatccaaactctgagaaagagaaggagctagagaaacaggcccgc
atagaggccagtctaagggaaagagagcgcatggtgcagagatttcgctcggagcagacc
aaagagattgaccgtgagagagaacagcacaagagggaggaagctgtccagaattttaaa
gcgctcttgtctgatatggtaaagtcatctgatgcaaactggtcagagacacgtcggacc
ctgaggaaggatcaccgctggcagtcatcctcactgctggagagggatgagaaagagagg
ctctttaacgagcacatcgaggccctcggaaagaagaaaaaggagctatttcgccaactt
ctggatgagacgacctccatcaatttgatgacatcttggaaggaagtgaagaaactcatt
aaagaagatccaagatgcatcaagttttccagcagtgacagaaaaagacagagggagttt
ggtgattacatcaaagacaagtacatcacagccaaagcagacttccgaactcttctgaaa
gagaccaagttcatcacctacaaatcacgtaagttgatgcaggagtcagagcagcagttg
tcggacatagagaagatcttgcaaaaggataaaaggtacctggttctggactgtatgtca
gaagagaggcacaaactcctcatggcgtatgtggaggagctggaccgcaggggaccacct
ccacctcccactgcctttgaacctgctcgacgctccactaaatga
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