Sinocyclocheilus rhinocerous: 107752507
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Entry
107752507 CDS
T04916
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
srx
Sinocyclocheilus rhinocerous
Pathway
srx03022
Basal transcription factors
srx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
srx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107752507
09124 Replication and repair
03420 Nucleotide excision repair
107752507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
srx03021
]
107752507
03400 DNA repair and recombination proteins [BR:
srx03400
]
107752507
Transcription machinery [BR:
srx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107752507
DNA repair and recombination proteins [BR:
srx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107752507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Matrix
Motif
Other DBs
NCBI-GeneID:
107752507
NCBI-ProteinID:
XP_016423985
UniProt:
A0A673GPJ0
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEDILFQAKRKRVFEGHGQVRLGMMRH
LFVIIDSSRSMEDQDLKPNRLTSTLKLMEFFVEEYFDQNPISQIGIITTKNKRAEKLTDL
AGNPKKHLAALKKAVDSTCVGEPSLYNSLNVAMQTLKHMPAHTSKEILVIFSSLTTCDPA
NIYELIKTLNALKIRVSVIGLSAEVRVCTILTRETGGSYNVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHVIASMSDQDAKPSFSMLHLDSTGEPGLTLGGYYCPQCRAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLEAFQETPLEEYEGERFCETCQGELKDKCVFTC
LACKKVFCVECDLFIHDTLHCCPGCMQTDRTS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagcaaaacgctgggaaggaggatacgaacgaacatgggag
gtgctgaaggaggatgaatctggatctctcaaagctactgtggaggacattcttttccaa
gcaaagaggaaaagagtgtttgagggtcatggacaagttcggcttgggatgatgcggcac
ctctttgtgatcattgactcatctagatcaatggaagatcaggacctgaagcccaacagg
ctgacctcaaccttgaagctgatggagttttttgtggaggaatactttgaccagaatcca
atcagtcagattgggatcattaccaccaagaacaagagggcggagaagctcactgatctt
gcagggaaccctaagaagcatttagcagctctgaagaaagctgtggactccacatgtgtt
ggtgaaccatctctctacaactctctcaacgtggctatgcagactctcaaacacatgcct
gctcatacaagcaaagagattctcgttattttcagcagtcttactacctgtgacccagcc
aacatctatgagcttatcaaaactctgaatgctttgaagatcagagtgtctgtgataggc
ctgtcagcagaagttcgagtgtgcaccattctcacaagagaaactggaggatcctacaat
gtaatattggatgagagtcattttaaagagctgctgatgctgcatgtgaagccgcctcct
gccagctcctcctcagagtgctccctcattcgcatgggtttccctcagcatgtcatagcc
tccatgtctgatcaggatgccaaaccctcgttcagcatgttgcacctagacagcactggt
gagccaggactcactcttggtggctactactgcccacagtgtagagccaaatacactgag
ctgccagtggagtgtaaagtgtgtggtctgactttagtttccgctcctcacctggcccgt
tccttccatcacctcttccccctggaggccttccaggagaccccgctggaggagtatgag
ggggagaggttctgtgagacctgccaaggagagttgaaagacaaatgtgtatttacttgc
ctggcatgtaaaaaagtgttctgcgtggagtgtgatctcttcatacatgacacactgcac
tgctgtcctggctgtatgcagactgacaggacatcctga
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integrated database retrieval system
