Serratia plymuthica S13: M621_22470
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Entry
M621_22470 CDS
T02716
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehdyrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
sry
Serratia plymuthica S13
Pathway
sry00250
Alanine, aspartate and glutamate metabolism
sry00310
Lysine degradation
sry00350
Tyrosine metabolism
sry00650
Butanoate metabolism
sry00760
Nicotinate and nicotinamide metabolism
sry01100
Metabolic pathways
sry01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
M621_22470 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
M621_22470 (gabD)
00310 Lysine degradation
M621_22470 (gabD)
00350 Tyrosine metabolism
M621_22470 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
M621_22470 (gabD)
Enzymes [BR:
sry01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
M621_22470 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
M621_22470 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
M621_22470 (gabD)
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Motif
Pfam:
Aldedh
AcnX_swivel_put
Motif
Other DBs
NCBI-ProteinID:
AGP46110
UniProt:
S4YNS5
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All DBs
Position
complement(4778274..4779728)
Genome browser
AA seq
484 aa
AA seq
DB search
MKLNNPELLRSQCLINGEWCDALSGRREAVINPATGAELASIPLVSEEETQQAINAAQLA
QQGWKQLTAKQRSVLLLAWADKVLAAQEDLAQLMTAEQGKSLAEARGEVAYAASFITWFA
EEAKRVDGAVLQAPLASQRLVVVKQPIGVCAAITPWNFPAAMITRKVAPALAAGCAMIVK
PAEQTPLTALALAKLAQDAGIPPGVLQVVTGDAAQVGKVLCDSPVVRKLSFTGSTEVGRI
LMAQCAPTIKKLSLELGGNAPVIVFDDANLDAAVAGIMASKFRNSGQTCVCANRIYVQDG
IYDRLVDKLVAAVEQLKVGDGSHEGTTQGPLIDQDAVDKVQSHIDDALIKGAQIAIGGQP
HELGRTFFQPTVVTGVTQKMRFAREETFGPVAPLFRFHDEAEAIAMANDTEFGLAAYLFT
QSASRQWRVPEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSRYGIEEYLELKYLCI
DVSC
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaataatcccgagctgctgcgcagccagtgcctgattaacggtgagtggtgc
gacgcgttgagcggccggcgtgaagcggtcatcaacccggcgaccggtgctgagctggca
agcattccgttggtcagcgaagaagaaacgcagcaggcgattaacgcggcgcagttggcg
cagcagggctggaaacagctgaccgccaaacagcgctccgtgctgttgctggcctgggcc
gacaaggtgctggcggcccaagaggatttggcgcagctgatgaccgccgagcagggtaaa
tcgctggcggaagcgcgcggtgaagtcgcctatgccgcttcgtttattacctggttcgcc
gaagaggccaagcgtgtcgacggtgccgtgttgcaagcgccgctggcctcgcagcgcctg
gtggtagtgaaacagccgatcggcgtttgcgcggcgatcacgccgtggaactttccggcg
gcgatgatcacccgcaaggttgcgccggcgttggctgcgggctgcgcgatgatcgtcaaa
ccggccgaacagacgccgctgaccgcgttggcgttggcgaagctggcgcaggatgccggc
attccgccaggcgtgttgcaggtggtgaccggcgacgcggcgcaggtaggcaaggtgctg
tgcgacagcccggtggtacgcaaactgagctttaccggttcgaccgaggtcggccgcatt
ctgatggcgcagtgcgcgccgacgattaaaaaactgtcgctggagctggggggcaacgcg
ccggtgatcgttttcgacgacgccaatctggacgcggcggtggcgggcattatggcctcc
aagttccgtaacagcggccagacctgcgtctgcgccaaccgcatctacgtgcaggacggc
atctacgatcgtttggtggacaagctggtggcggcggttgagcaactgaaggtcggtgac
ggcagccatgaaggcaccactcaggggccgctgatcgaccaggacgcggtggataaagtg
cagagccacattgacgatgcgctgattaaaggcgcgcaaattgctatcggcgggcagccg
cacgaactgggtcgaaccttcttccaaccgacggtggtgaccggcgtgacgcaaaaaatg
cgcttcgcccgggaagaaacctttggcccggtggcgccgctgttccgtttccatgatgaa
gcggaagcgatcgccatggccaacgacaccgaattcggtctggccgcttatctgtttacg
cagagtgcctcgcgccaatggcgagtgccggaagcgctggaatacggcatggtcggcatc
aacaccgggctgatctccaatgaagtcgcgccgtttggcggtgtgaagcagtcaggactc
ggacgtgaaggatcgcgttacggcattgaagaatatctggagctgaaatacctgtgtatc
gatgtgagctgttaa
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