Serratia rubidaea: AXX16_4393
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Entry
AXX16_4393 CDS
T04417
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
srz
Serratia rubidaea
Pathway
srz00300
Lysine biosynthesis
srz00550
Peptidoglycan biosynthesis
srz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
srz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AXX16_4393
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXX16_4393
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
srz01011
]
AXX16_4393
Enzymes [BR:
srz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AXX16_4393
Peptidoglycan biosynthesis and degradation proteins [BR:
srz01011
]
Precursor biosynthesis
Amino acid ligase
AXX16_4393
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AML60063
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Position
complement(4709513..4710928)
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AA seq
471 aa
AA seq
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MILDSRIAAAGDLFVAVNGHQTDGRRYIPQAIAQGVAAVIAEAEGAAEDGEIRTMHGVPV
IYLGQLNQRLSALAGRFYHQPAERLRLIGVTGTNGKTTTTQLLAQWGQLLGETSAVMGTV
GNGLLGQECPTENTTGSAVDVQHVLNDLAERGATLAAMEVSSHGLVQSRVAALPFAAAVF
TNLSRDHLDYHGDMASYEAAKWSLFADHQVGQAIINADDEVGQRWLAQLPDAVAVTMQDN
LQPGCHGRWLKATAVDYHDNGATLRFSSSWGDGEIESRLMGAFNVSNLLLALATLLSLGY
PLAALVASAKQLQPVCGRMEVFNAPGKPTVVVDYAHTPDALEKALEAARLHCRGQLWCVF
GCGGDRDKGKRPLMGAIAEQFADRVVITDDNPRTEEPQAIIADILSGLLDAGRAQVIHGR
AEAVTSSVMQAKEQDVVLVAGKGHEDYQLVGNRRLDYSDRTTVARLLGVMA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatattagacagccggattgcggctgccggggatctgtttgtcgccgtcaacggccac
caaacggatggtcgccgctatattccgcaagccatcgcccagggcgtcgccgcagtgatc
gcagaagctgaaggcgccgccgaagacggtgaaattcgtaccatgcacggcgtgccggtg
atttatctcggccagctgaaccagcgtctgtcggcgctggccggccgtttttaccaccag
ccggccgagcgcctgcgtctgatcggcgtgaccggcaccaacggtaaaaccaccaccacc
cagctgctggcgcagtgggggcagctgctgggcgaaaccagcgcggtgatgggcaccgtc
ggcaacggcctgttgggccaggagtgtccgacggagaacaccaccggttcggcggtggat
gtacagcatgtgttaaatgacctggcggagcgcggcgcgacgctggcggcgatggaagtc
tcttcccacggtctggtgcaaagccgcgtggcggcgctgccgtttgccgcggcggtgttc
accaacctgagccgcgaccatctggattaccacggcgacatggccagctacgaagcggcg
aaatggtcgctgtttgccgaccatcaggtcggtcaggccattatcaatgccgatgatgaa
gtcggtcagcgctggctggcgcagctgccggatgcggtggcggtcactatgcaggacaat
ctgcagccgggctgccacggccgctggctgaaggccaccgccgtggactatcacgacaat
ggcgctacccttcgtttcagctccagctggggcgacggcgagattgaaagccgcctgatg
ggcgcgtttaacgtcagcaatctgctgctggcgctggcgacgctgctgtcgctgggctat
ccgctggcggcgttggtggccagcgcgaagcaactgcagccggtctgcggccgtatggaa
gtgtttaacgcgccgggcaagccaacggttgtggtcgactacgcccacacgccggacgcg
ctggagaaagcgctggaagccgcgcgcctgcactgccgcgggcagctgtggtgcgtcttc
ggctgcggcggcgaccgcgacaaaggcaagcgtccgctgatgggcgccattgccgagcag
tttgccgatcgggtggtgatcaccgacgacaacccgcgtaccgaagagccgcaggcgatt
atcgccgacatcctgagcggcttgctggacgccggccgggcgcaggtgattcacgggcgt
gccgaagcggtcaccagttcggtgatgcaggcaaaagagcaggacgtggtgctggtggcc
ggtaaaggccatgaagattatcaactggtgggcaatcgccgtctggattattccgaccgc
accaccgtcgcgcgtttgctgggggtgatggcatga
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