Swingsia samuiensis: E3D00_05835
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Entry
E3D00_05835 CDS
T06080
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ssam
Swingsia samuiensis
Pathway
ssam01501
beta-Lactam resistance
ssam01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E3D00_05835
01503 Cationic antimicrobial peptide (CAMP) resistance
E3D00_05835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssam02000
]
E3D00_05835
01504 Antimicrobial resistance genes [BR:
ssam01504
]
E3D00_05835
Transporters [BR:
ssam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E3D00_05835
Antimicrobial resistance genes [BR:
ssam01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E3D00_05835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QDH17137
UniProt:
A0A4Y6ULA0
LinkDB
All DBs
Position
1265510..1268686
Genome browser
AA seq
1058 aa
AA seq
DB search
MSISRFFIDRPIFAWVIGLVIMLIGGVTITRMPIAQYPSIAPPQIAISVMYPGASAETVN
NTVVRPILQQMYGLDHLEYLSASSYASGQMEIDLTFAQGTNPDIAQVQVQNKLQLAQPRL
PTEVTAQGISVTKATKNFMMVVGFISTDGSMSGADVADYVASNISDPLSRVSGVGDHTLF
GSEYAMRIWLDPTKLYNYNLAISDVQSAIQTQNIQVSSGELGGLPAKKGIGFDATVIGPT
RLSSPEQFENILIKVQQDGSQVRLKDIARVELGAQSYALSSMYNNQPAAAMAIKLAPGAN
QLETEAALRAKIAQLEHFYPPGLKTIYPLDTEPFITLSIQEVVETLLEAIALVFIVMLVF
LQNFRATLIPTIAVPIVLLGTFGIIHALGYTINTLTMLAMVLAVGLLVDDAIVVVENVER
LMSEKQLSPKEASRQSMDEISGALIGIVLVLTAVFLPMAAFNGSTGVIYRQFSITIVTAM
WLSVVVAMIMTPALCGSMLKPTSEKKRGPAAWFNRNFDRMTNGYLSGVKWLVNGRVVSGI
IYIALTAVVVVLFLRIPGGFLPDEDQGLIFGQVTMRNNATRQQAAAVNKKITDYVLKTYS
QDVASVFTMTGFSFAGQGQTTAAFFVRMKPWDQRHGFAHTTMAISRKIMQHFWTDPDAQI
FAVNPPAVLELGNATGFDLELEDVGHLGHAALLAARNQVLADAAKDPLLQAVRPLGMEDA
PQFVLDINRERANALSINNADINTTIQGVLGSIYVNQFMRNDRVKQVYIQGDAWARMTPE
NLNLWYIRNSLGSLVPFNAFASGHWSSGAQKVENYNGSNSYEIQGQPVTGSSSGEAMDEM
RKILSKLPQGVGYEWTGLSYEQIASSGSTGPLYALAGIIILFCLAALYESWAIPLAVMLV
LPLGVLGAVIATLTRGLDNDVYFQVGLLTTIGLSVKNAILIVEFAKAFFEAGKSLEESVL
EAARERLRPILMTSIAFVCGVFPLAIATGAGSAARVAIGTCVVGGMFTATLLAVYFVPVF
FVMTLRLFRVQRIRDRKDPYAYLDEKNQTSDKQGEQGV
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttcacggttttttattgataggcctatttttgcttgggtaattggcttggtg
attatgctgattggtggggtaaccatcacccgcatgccaatagctcaatacccgagtatt
gctccccctcagattgctatttcagtgatgtatcctggtgcttcggctgaaacggtaaat
aacacagttgttcggccgattttacagcaaatgtacggactggaccatcttgagtattta
tcagcttcttcttacgcaagcggtcagatggagattgatctgacatttgcgcaggggact
aacccagatattgctcaagtgcaggtgcaaaacaaactacaacttgcacagcctcgatta
cccacagaggtaacggctcaagggataagcgtcacaaaagcgactaaaaactttatgatg
gttgtaggcttcatctcaacagacgggagtatgtctggtgcagatgttgctgattatgtg
gcttccaatatttctgatcctctttcccgtgtcagtggtgttggtgatcatactttgttt
ggttctgaatatgcgatgcgtatttggttagacccaaccaaactttataattataatctg
gccatttctgacgttcaaagtgcgattcaaacacaaaatattcaggtttcctctggtgag
cttggggggctccccgcaaagaagggaattggttttgatgcaacagtgatagggccaacg
cgtctcagctcaccagagcagtttgaaaatattctgattaaagtccagcaagacggcagt
caggtgcggctgaaagatattgcccgtgttgagcttggtgctcaaagttatgctttgtct
tcaatgtataataatcagccggctgctgctatggctattaaactggctcctggcgctaat
cagttggaaacagaagcagctttacgggcaaagattgctcagcttgagcatttttatcct
ccaggtttgaaaacaatttacccattggatacagagccttttattactctttcgattcaa
gaggtagttgaaacgcttctggaagctattgctcttgttttcattgtaatgctggtcttc
ctgcaaaactttcgagcaacacttatcccaacgattgctgttcccattgttcttttgggg
actttcggcattatccatgcgctaggctacacgattaatacattgacaatgttggcgatg
gtgttggctgttggcttgttggttgatgatgctatcgttgttgttgaaaacgttgagcgg
cttatgtcggagaagcagctttcacctaaagaagcttctcgtcagtcaatggatgaaatt
tctggagcattgattggtattgttctggtcttgacggccgtgttcttaccaatggctgca
tttaatggctcaactggtgttatttatcgtcagttttcgatcacgattgttacggcgatg
tggctgtcggtagtcgtggctatgattatgacgccagctttatgtggttctatgttaaag
ccgacgtcagagaaaaagcgaggccctgctgcatggtttaaccgtaactttgaccggatg
accaatggttatttgagtggcgttaagtggttggtaaatggtcgagtagtcagtggtatt
atctatatcgcgttaacggctgttgttgtggtgctatttttacgtattccaggtgggttt
ctacctgatgaagaccaagggttgatctttggtcaggtcacgatgcgtaataatgcgaca
agacagcaggctgccgcagtaaataaaaaaatcactgattatgttttaaaaacatatagc
caggatgttgcttctgtttttacaatgacagggtttagttttgcgggccaagggcaaacg
acggcggcgttcttcgttcgtatgaagccatgggatcaacggcatgggttcgctcataca
accatggccatttcgcgtaagattatgcagcatttctggacagacccagatgcgcagatt
tttgctgtgaaccctcctgctgttctggagctcgggaatgcaacagggttcgatttggag
ttggaagatgtcgggcacttagggcatgctgctcttttggctgcacgtaatcaggttctg
gcagatgcagcaaaggatcctctcctgcaagctgttcggcctcttggaatggaagatgct
cctcagtttgttctggatatcaaccgtgaaagagcaaatgcgctcagtattaataatgct
gatattaataccactattcaaggcgtactggggtctatttacgttaaccagtttatgcgg
aatgaccgtgtaaaacaggtatatatccaaggtgatgcttgggcgcgtatgaccccagag
aatctgaacttatggtatattcgtaatagcttgggttctttggtgccatttaatgccttt
gcttcagggcattggagcagtggggcacagaaggttgaaaactataacggttcaaactcc
tatgaaatacagggccaacctgtaacagggtctagctccggtgaagcaatggatgagatg
cgtaaaattctcagtaaattgccgcaaggcgtaggatatgagtggactggcttgtcttat
gagcagattgcatcgagtggttctacaggtcctctttatgcgctagccgggattatcatt
ctgttttgcttggccgctttatacgaaagctgggcaatcccgcttgccgttatgcttgtg
ctcccacttggtgttttgggggctgtgattgcgacgctgacccgagggcttgataatgac
gtttacttccaagtggggctgcttacgacaataggtttgtctgttaaaaatgcgatcttg
attgttgagtttgccaaagccttctttgaagcaggaaaatcattagaagagtccgtactt
gaggcggcacgcgaacgtttgcgtcctattttaatgacatcgattgcatttgtatgtggt
gtgtttcctttggcgattgcaactggggcagggtctgctgctcgtgttgccattgggaca
tgtgtcgtcggtggtatgtttacagcaacattgctcgctgtttatttcgtaccggttttt
ttcgtcatgactctgcgcttgtttcgtgtgcagcgtattcgtgatcgtaaagatccatat
gcttatttggatgaaaaaaatcagacatccgataagcagggagaacaaggcgtatga
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