Swingsia samuiensis: E3D00_06645
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Entry
E3D00_06645 CDS
T06080
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
ssam
Swingsia samuiensis
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssam03009
]
E3D00_06645
Enzymes [BR:
ssam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
E3D00_06645
Ribosome biogenesis [BR:
ssam03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E3D00_06645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QDH17271
UniProt:
A0A4Y6ULL1
LinkDB
All DBs
Position
1429901..1430887
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AA seq
328 aa
AA seq
DB search
MKVVNRIITEDEADLRLDRWFRRHYPHLTQGALQKLCRKGQVRVDGARVQTNTRLLPGQS
VRVPPMPDVSRPAPLPDPDPMLAREIEKMVIYQDEHLLVLDKPSGLATQGGPGITKHIDM
MLDGLRKEGAERPRLVHRIDRDTSGILLIARTPGVAAKLAAAFRSRDVEKTYWAVVVGRP
TPGSGIIDQPLVKVGAGGAALVVPASRDEEDASSAKSEYETLDAAGRKFSWLALSPLTGR
THQLRVHCESLGTPILGDPRYGGKAAHPEGFTDRLHLHARQLDIPHPAGGRLKVTAPLPA
HMRDTFRSLGFVAGGTPQPERIKGKGPK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgttaatcgcattataactgaagatgaggctgatttacgtctcgatcgttgg
ttcagacggcattaccctcatttgacgcaaggtgctttacagaagctttgccgaaaaggt
caggtgcgtgttgatggagcgcgtgtgcaaacgaatactcgtttgctccccgggcaaagt
gttcgtgttcctcctatgccggatgtcagtcgtcccgcacctcttcctgacccggatcca
atgttggcgcgggaaattgagaagatggtgatttatcaagatgagcatctgcttgtcttg
gataaaccctcgggtctggccactcaaggcggcccaggcattacaaagcatattgatatg
atgctcgatgggctgcgcaaagagggagctgaacgcccacggctggttcatcggattgat
cgtgatacctccggtattcttttaatcgcacgcacacccggagtggctgcaaaattagcg
gctgcttttcggagccgtgatgttgaaaaaacatattgggccgttgtcgtcggtcggccg
acacccggatctggaattattgatcagccgctggtgaaggttggtgctggtggagcagcg
cttgttgttcctgcatcccgtgatgaagaagatgcgtcttctgcaaaaagtgaatatgaa
acgttagacgccgctgggcgtaaattctcatggctggcgttatctccacttacaggacgt
acccaccagttacgtgtgcattgtgaatctttagggacgccaatccttggagatccacgg
tatgggggaaaggcagcgcatccagaaggctttacagatcggttgcatctgcatgctcgt
cagcttgatattccgcatccagcaggaggcaggctcaaagtgacggctccattgcctgct
catatgcgtgatacttttcgttctttaggttttgtcgctgggggaactccacagcccgaa
cgtataaaaggtaaaggtcctaagtaa
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