Streptococcus suis BM407 (serotype 2): SSUBM407_0565
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Entry
SSUBM407_0565 CDS
T00935
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ssb
Streptococcus suis BM407 (serotype 2)
Pathway
ssb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SSUBM407_0565 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssb03400
]
SSUBM407_0565 (fpg)
Enzymes [BR:
ssb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SSUBM407_0565 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SSUBM407_0565 (fpg)
DNA repair and recombination proteins [BR:
ssb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SSUBM407_0565 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zf-TFIIB
OrfB_Zn_ribbon
zinc-ribbons_6
Auto_anti-p27
DUF4862
Motif
Other DBs
NCBI-ProteinID:
CAZ55399
UniProt:
A0A0H3MUD7
LinkDB
All DBs
Position
625163..625990
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AA seq
275 aa
AA seq
DB search
MPELPEVETVRRGLNRLVKGKVISKVEVTYAPMIKTGVDAFCQDLIGQEILDVDRRGKYL
LIYLTDHVLISHLRMEGKYNFFADQVPANKHFHAFFTFIDGSTLVYQDVRKFGTMELLGK
ADVDAYFISRKIGPEPTEEDFDLEEFAKKLAKSKKPIKSHLLDQSLVAGLGNIYVDEVLF
KAKVHPAQTSNQLSTDQVADLRQATIEVLQLGIEKGGSTIRTYKNALGMDGTMQDYLQVY
GKTGQACPRCQTEIVKIQLGGRGTHFCPKCQVKHG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgaattgcctgaggttgagacggttcgtcgtggtttgaatcgtttggtcaaggga
aaagttatttccaaggtggaggtgacctatgctcccatgattaagacaggtgtggatgcc
ttctgccaagacttgattggtcaggagattttagatgtggaccgtcgtggcaagtatctc
ttgatttacctgacagaccatgtcctcatttctcatttgcggatggaaggtaagtacaat
ttctttgctgaccaggtgcctgccaacaaacatttccatgccttttttacttttatagat
ggctcgaccttggtctatcaagatgtccgcaagtttgggaccatggaactgctgggtaag
gcagatgtggatgcctattttatcagtcgaaaaattggtcctgagccgacggaggaagat
tttgacttagaagaatttgccaaaaagttagctaagtcgaaaaagcccattaagtcgcat
cttttggaccagtctttggtggctggtttgggcaatatttatgtcgatgaggtcttgttc
aaggccaaagttcatcctgcacaaacgagtaatcagctgtcgacagatcaggtggcagac
ctccgtcaagccaccattgaagtcctgcaactgggtattgaaaaaggtggttcaaccatt
cggacttacaaaaatgccttgggcatggatgggactatgcaggattatttacaagtttac
ggaaagacagggcaggcctgtccccgttgccagacagagattgtcaaaatccagctgggc
ggacgggggacacatttctgtcccaagtgtcaggtgaaacatggctaa
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