Sus scrofa (pig): 100144458
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Entry
100144458 CDS
T01009
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03022
Basal transcription factors
ssc03420
Nucleotide excision repair
ssc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100144458 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
100144458 (GTF2H4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100144458 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssc03021
]
100144458 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100144458 (GTF2H4)
Transcription machinery [BR:
ssc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100144458 (GTF2H4)
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100144458 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
100144458
NCBI-ProteinID:
NP_001116592
Ensembl:
ENSSSCG00000001383
Vega:
OTTSUSG00000001300
UniProt:
A0A4X1VHW7
Q767M2
LinkDB
All DBs
Position
7:23398414..23404268
Genome browser
AA seq
463 aa
AA seq
DB search
MESTPSRGGLNRVHLQCRNLQEFLGGLSPVVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSAEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLRELGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaccccttcaaggggtggactgaatcgagtacacctacaatgcaggaatctg
caggaattcttagggggcctgagccctgttgtattggaccgattgtatgggcaccctgcc
acctgtttggctgtcttcagggagctcccatctttagctaagaactgggtgatgcggatg
ctctttctggagcagcctctgccacaagctgccgtagccttgtgggtgaagaaggaattc
agcaaagcccaggaggaaagcacggggctgctgagcggcctccgtatctggcacacccag
ctgctccctggtggcctccagggcctcatcctcaaccccatcttccgccaaaacctccgc
attgcccttctgggtgggggcaaggcctggtctgatgacacaagtcagctgggaccagac
aagcatgcccgggatgtgccctcgcttgacaagtatgctgaggagcgatgggaggtggtc
ctgcacttcatggtgggctcccccagtgcagccgtcagccaggacttggctcagctcctc
agccaggctgggctcatgaagagtgctgaacctggagagccgccttgcattacctctgcg
ggcttccaattcctgttgttggacaccccggcccagctctggtactttatgttgcagtac
ctgcagacagcccagagtcggggcatggacctagtggagattctctccttcctcttccag
ctcagcttctctactctgggcaaggattactctgtggaaggtatgagtgattctctgttg
aacttcctgcaacatctccgtgagttgggccttgttttccagaggaagaggaagtctcgg
cgttactaccccacgcgcctggccatcaatctctcatcaggtgtttctggggctgggggc
actgtgcatcagccaggtttcatcgttgtggaaaccaattatcgactgtacgcctacacg
gagtcggagctgcagatcgcccttattgcccttttctctgagatgctctatcgcttcccc
aacatggtggtggcacaggtgacccgggagagtgtgcagcaggccattgccagtggcatc
acagcccaacagatcatccatttcctaaggacaagggcccacccagtgatgcttaaacag
acacctgtgctgcctcccaccatcacagaccagattcggttgtgggagctagaaagggac
agactacggttcactgaaggcgtcctctataaccagttcctgtcacaagtggactttgag
ctgctgctggcccacgcgcgggagctgggcgtcctagtgttcgagaactcggcaaagcgg
ctcatggtggtgaccccggcgggacacagcgacgtcaagcgcttctggaagcggcagaag
cacagctcttga
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