Sus scrofa (pig): 100153811
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Entry
100153811 CDS
T01009
Symbol
RANGAP1
Name
(RefSeq) LOW QUALITY PROTEIN: ran GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100153811 (RANGAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssc03019
]
100153811 (RANGAP1)
Messenger RNA biogenesis [BR:
ssc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100153811 (RANGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_8
LRR_4
CPSF100_C
Nop14
IFN-gamma
RNA_pol_Rpc4
DNA_pol_phi
Nse4-Nse3_bdg
Presenilin
Rrn6_K-rich
PPP4R2
NOA36
Mat89Bb
Motif
Other DBs
NCBI-GeneID:
100153811
NCBI-ProteinID:
XP_020947120
LinkDB
All DBs
Position
5:7210974..7240965
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AA seq
586 aa
AA seq
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MASEDIAKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDGLEALRLEGNT
VGVEAARVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLS
DNAFGPDGVRGFEALLRSSTCFTLHELKLNNCGMGAGGGKILAAALTECHRKSSAQGKPL
ALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVTALAQAFAINPLLRX
INLNDNTFTEKGAVAMAKTLKTLRQVEAINFGDCLVRSKGAVAIADAVRGGLPKLKELNL
SFCEIKRDAALSVAEAVADKAKLEKLDLNGNTLGEEGCEQLQEVLDGFNMAKVLASLSDD
EGEDDEDEEEEGEEEEEEEEEEEEEEEEEEEEEEEEPQQGEQGEEPATPPRKILDPTSGE
PAPVLSSPPPADVSTFLAFPSPEKLLRLGPKSSVLIAQQTDTSDPEKVVSAFLKVSSVFK
DEAAVRTAVQDAVDALMKKAFGSSAFNSNAFLTRLLIHMGLLKSEDKIKAIANLYGPLMA
LNHMVQQDYFPKALAPLLLAFMTKPNGALESCSFARHNLLQTLYKV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgaagacattgccaagctggcagagacacttgccaaaacccaggtggccggg
ggacagctgagtttcaagggcaagagcctcaaactcaatactgcggaagatgccaaagac
gtgatcaaggagattgaagattttgacggcttagaggccttgcgcctggagggcaacacg
gtgggcgtggaagcagccagggtcatcgccaaggccttggagaagaagtcagagttgaag
cgatgccactggagcgacatgttcacggggaggctgcggtcggagatcccacccgccctg
atctcactcggggagggcctcatcaccgccggagcccagctggtagagctggacctgagt
gacaatgcgttcgggcccgacggcgtgcgcggcttcgaggccctgctcaggagctccacc
tgcttcaccctgcatgaactcaagctcaacaactgcggcatgggcgccggtggcggcaag
atcctggcagctgctctgactgagtgtcaccgcaaatccagtgcccagggcaagcctctg
gccctgaaggtcttcgtggctggcagaaaccgtctggagaacgacggagccactgccttg
gcagaagcttttgggatcatcgggacactggaggaggtccacatgccacagaacgggatt
aatcaccctggtgtcactgccctggcccaggcttttgccatcaaccccctgctgcggntc
atcaacctgaacgacaacaccttcactgagaagggcgccgtggccatggccaagacgctg
aagaccctgcggcaggtggaggccatcaacttcggggactgcctggtgcgctccaagggc
gccgtcgccatcgccgacgccgtgcgcgggggcctgcccaagctgaaggagctgaacttg
tctttctgtgagatcaagagagatgctgccctgtctgtggccgaggctgtggcagacaag
gccaagctggagaaactggacctcaatggcaacaccctgggagaagaaggctgtgagcag
ctccaggaagtgctggatggcttcaacatggccaaggtgctggcgtccctcagtgatgat
gagggcgaggatgacgaagacgaggaggaggaaggagaggaggaggaggaagaggaggag
gaggaggaagaggaggaggaggaggaggaagaggaggaggaagaagagccacagcaggga
gagcaaggggaggagccggccacaccgcccaggaagatcctggaccctaccagtggggaa
ccagctcctgtcctgtcctccccgcctcctgcagacgtctccaccttcctggcctttcca
tccccggagaagctgctgcgcctcgggcccaagagttcggtgctgatagcgcaacagact
gacacgtccgacccggagaaggtggtctccgccttcctgaaggtgtcctctgtgttcaag
gacgaagccgcagtgagaacagcagtgcaggatgcagtagatgccttgatgaagaaggcc
ttcggctcgtcggccttcaactccaacgccttcctcacccggctcctcatccacatgggt
ctgctcaagagtgaagacaagatcaaggccattgccaacctgtacggccccctgatggcg
ctgaatcacatggtgcagcaggactacttccccaaggccctcgcacccctgctgctggcg
ttcatgaccaagcccaacggcgccctggagtcctgctcctttgcccgccacaacctgctg
cagacgctgtacaaggtttag
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