Sus scrofa (pig): 100154432
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Entry
100154432 CDS
T01009
Symbol
RPN2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 precursor
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00510
N-Glycan biosynthesis
ssc00513
Various types of N-glycan biosynthesis
ssc01100
Metabolic pathways
ssc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
100154432 (RPN2)
00513 Various types of N-glycan biosynthesis
100154432 (RPN2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100154432 (RPN2)
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Gene cluster
GFIT
Motif
Pfam:
Ribophorin_II
HSM3_N
DUF5859
Motif
Other DBs
NCBI-GeneID:
100154432
NCBI-ProteinID:
NP_999106
Ensembl:
ENSSSCG00000028227
UniProt:
Q9GL01
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Position
17:40322364..40378866
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AA seq
629 aa
AA seq
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MAPPGSRTVLLLALTIIARTQALKPTHYLTKHDVERLKASLDRPFTSLESAFYSIVGLSS
LGAQVPDEKKACTFIKSNLDPSNVDSLFYPPQSSQALSGCEISISNETKDLLLAAVSEDS
SVTQIYHAVAALSGFGLPLASQEALGALTARLSKEETVLATVQALQTASYLSQQADLRSI
VEEIEDLVARLDELGGVYLQFEEGLLETTALFVAATYKLMDHEGTEPSIKEDQVIQLMNT
IFSKKNFESLPEAFSVASAAAALSQNRYHVPVVVVPEGSPSDTQEQAFLRLQVTNVLSQP
LTQATVKLEHAKSVASRATVLQKTSFTPVGDVFELNFVNVKFSSGYYDFSVKVEGDNRYI
ANTVELRVKISTEVGITNVDLSTVDKDQSIAPKTTRVTYPAKAKGPFIADSPQNFALFFQ
LVDVNTGAELTPHQTFVRLHNQKTGQEVVFVAEPDSKNVYRFELDTSERKIEFDSASGTY
TLYLIIGDATLKNPIHWNVADVVIRFPEEDAPSTVLSKNLFTAKQEIQHLFRDPEKRPPT
VVSNTFTGLILSPLLLLFALWIRIGAKISNFTFGLTIIFHLGHAMLAMYVYWTQLNMFQT
LKYLAILGSVTFLAGNRMLAQQAIKRTAH
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgggttcaagaactgtcttgctgttggccctgacaatcatagccagaacc
caggctctgaagcccacccactacctcaccaagcatgacgtggagagactgaaagcctca
ctggaccgccctttcacaagtttggaatctgctttctactccattgtgggactcagcagc
cttggtgcccaggtgccagatgaaaagaaagcttgcaccttcattaagtcaaaccttgat
cccagcaacgtggattcccttttctaccctccccagtccagccaggccctctcagggtgt
gagatctctatttcaaatgagaccaaagacctgcttctggcagctgtcagtgaagactcc
tctgtgacccagatctaccatgcagttgcagctctcagtggctttggccttcccttggct
tcccaagaagcgctcggtgctctcactgctcgcctcagcaaggaagagaccgtgctagca
acggtccaggctctgcagacagcatcctacctgtcccagcaggctgacctgagaagcatc
gtggaggagattgaggaccttgtcgctcgcctggatgaactgggaggtgtgtatctccag
tttgaagaaggactgctggaaacaacagcgttatttgtagctgccacctacaagctcatg
gaccacgaggggactgagccgtccattaaggaggatcaggtcatccagctaatgaacacc
atctttagcaagaagaactttgagtcactcccagaagccttcagtgtggcctctgctgcc
gctgcactctcccagaatcgctaccatgtgcctgttgtggttgtgcctgaaggctctcct
tccgacactcaggaacaggctttcctgcggttgcaggtcaccaacgttctgtcccagcct
ctgactcaggccactgttaaactagaacatgctaagtctgttgcttccagagccacggtc
ctccagaagacgtctttcacccctgtgggagatgtttttgagctaaacttcgtgaatgtc
aagttttccagtggttattatgacttttctgtcaaagttgagggtgacaatcgttatatt
gcaaatactgtagagcttagagtcaagatttccactgaagttggcatcacaaatgttgat
ctctccactgtggataaggatcagagcattgcacccaaaaccacacgggtgacctaccca
gccaaggccaagggccctttcatcgcagacagcccccagaactttgctttattcttccag
ctggtagatgtgaacactggtgctgaactcacccctcaccagacatttgtccgactccac
aaccagaagactggccaggaagtggtgtttgtcgcagagccagacagcaagaatgtgtac
aggtttgaactggatacctccgagagaaagattgagtttgactctgcatccggcacctac
actctctacttgatcatcggagatgctactttgaagaacccaatccactggaatgtggct
gatgttgtcatcaggttcccagaagaagatgctccgtcgactgtcctgtccaagaacctt
ttcactgccaaacaggaaattcagcatctgttccgcgaccctgagaagaggcctcccacg
gtggtgtccaatacattcactggcctgatcctctcgcccttgcttctgctctttgctctg
tggatccggattggtgccaaaatctccaacttcacttttggcctaacgattatatttcac
ctgggtcatgctatgctngctatgtatgtctactggactcaactcaacatgttccagacc
ctgaaatacctggccatcctgggcagtgtgacatttttggctggcaatcggatgctggcc
cagcaggcaatcaagagaacagcacattag
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