Sus scrofa (pig): 100154500
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Entry
100154500 CDS
T01009
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03250
Viral life cycle - HIV-1
ssc04623
Cytosolic DNA-sensing pathway
ssc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100154500
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100154500
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100154500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssc03400
]
100154500
DNA repair and recombination proteins [BR:
ssc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100154500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
100154500
NCBI-ProteinID:
NP_001279034
Ensembl:
ENSSSCG00000007327
UniProt:
A0A023VTS2
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Position
17:complement(40117348..40171935)
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AA seq
627 aa
AA seq
DB search
MQSADSQQPSKRPRRDGSPTTPPNTPPAAAERSLGPNLHPDHRTWGPEQVCGFLNRSGFG
DSELLERCREKKITGSILPFLDESLLEDLGVSSYEKRMKLLNYIQRLGQTHVDTVKVIND
PIHGHIELHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVR
ELSEKQPELQISERDMLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPDVKWTHEQGSVNM
FEHLVNSNGLIDVMEHYGLIPEEDIWFIKEQITGPLESPVKNATWPYKGRPKEKSFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFIKFARVCEVDNKKHICTREKEVGNLY
DMFHTRNCLHRRAYQHKVGNIIDTMITDAFLKADPYIEITGSEGKKYRISTAIDDMEAFT
KLTDNIFLEILYSTDPKLDAARAILKKIECRNLYKFVGETQPGRQDKIKRENYESLPKGV
ASAKPSNIQLEAELKAEDFIVDVINMDYGMEDKNPIDNVRFYCKSDPNKAIIITKNQVSQ
LLPERFAEQLIRVYCKKTDEKSLFAARQHFVQWCLDNDFTKPQDGDVVAPLITPRKLEWN
STHSAQSQARTREASKSRVRLFAKDSV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgccgactcccagcagccctccaagcgaccccggcgcgatggcagcccgaca
accccgccaaacacccctccagcagcggcagagaggtccctgggccccaacctccaccct
gaccaccggacctggggcccggagcaggtgtgcggcttcctaaatcgcagtggcttcggc
gattctgaactgctggaacgctgccgagagaagaaaatcacaggttcaatactgcccttt
cttgatgagtctcttcttgaagatcttggagtaagttcctatgaaaagaggatgaaactc
cttaattatatccaacgactgggtcaaactcatgttgatacagtgaaggtgattaatgat
cctatccatggtcacattgaactccaccctctcctcatccgaatcatcgatacaccacag
tttcagcgcctgcgatacattaaacagctgggaggcggttactatgtttttccaggagct
tcacacaatcgatttgagcatagcctaggtgtggggtatctggcaggatgtcttgttcgt
gaactgagtgaaaaacaacctgagctgcagataagtgaacgagatatgctttgtgttcag
attgctgggctttgtcatgatcttggtcatgggccgttttcgcatatgtttgatggaaga
tttattccacttgctcgcccagatgtgaaatggacgcatgaacagggctcagttaatatg
tttgagcacctggttaattctaatggactcatagatgtcatggaacactatgggctcatc
cccgaagaagatatttggtttatcaaagaacaaattacaggaccacttgaatcacccgtc
aaaaatgccacgtggccatataaagggcgtcctaaagaaaaaagtttcctttatgaaata
gtggcaaataaaagaaatggcattgatgttgacaaatgggattactttgccagggactgc
catcatcttggaatccaaaataattttgattacaagcgctttattaaattcgcccgtgtc
tgtgaggtagataataagaagcatatttgtactagagaaaaggaggttggaaacctgtat
gacatgttccacacacgcaactgtttgcaccgcagagcttatcaacacaaagttggcaac
atcattgatacaatgattacagatgccttcctcaaagcagacccttacatagagataaca
ggttctgaaggaaaaaagtatcgcatttctacagcaattgatgacatggaggccttcact
aagctgacagataatatttttctggagattttatactctactgaccccaaactggatgct
gcacgagcgattttaaaaaaaatcgaatgccgtaatctctacaagtttgtgggtgagacc
caaccaggcagacaagataagattaaaagggaaaactacgaaagtcttccaaaaggggtc
gccagtgctaagcccagtaacatacagctagaagctgaactgaaggctgaagatttcata
gtggatgttatcaacatggattacgggatggaagacaagaatcctattgataatgttcgc
ttctattgtaagagtgaccccaacaaggcaatcataattactaaaaatcaggtttcacag
cttttgccagagagatttgctgaacagctaattcgagtttactgtaagaagacggatgaa
aagagtctgtttgctgcacgacagcattttgttcagtggtgcttagacaatgatttcacc
aagccacaggatggtgatgttgtagccccacttataacgcctcgaaaattggagtggaat
tccacgcattcagcccagagtcaagctcgcacccgagaagcatccaaatccagagtccga
ctttttgcaaaggactcggtgtga
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