Sus scrofa (pig): 100512175
Help
Entry
100512175 CDS
T01009
Symbol
CATSPERB
Name
(RefSeq) cation channel sperm-associated protein subunit beta
KO
K16893
cation channel sperm-associated protein subunit beta
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100512175 (CATSPERB)
04040 Ion channels [BR:
ssc04040
]
100512175 (CATSPERB)
Cilium and associated proteins [BR:
ssc03037
]
Motile cilia and associated proteins
Sperm associated proteins
100512175 (CATSPERB)
Ion channels [BR:
ssc04040
]
Voltage-gated cation channels
Calcium channel, sperm-associated (CatSper)
100512175 (CATSPERB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CATSPERB
CATSPERB_2nd
CATSPERB_1st
Sortilin-Vps10
Motif
Other DBs
NCBI-GeneID:
100512175
NCBI-ProteinID:
XP_020955279
LinkDB
All DBs
Position
7:complement(113201785..113293597)
Genome browser
AA seq
1105 aa
AA seq
DB search
MELLFLYVMILLLNMFDFSSGITYNKGDMENRFACASQGFPQKNEIIKLYLFSDDLKIQC
FFQSENELTSREFLSVFTSGGLAPSLGIINSTYTGIFHFNLTLFSDRVYWLIDIPRENIT
KNTDIAAVEEWLVRITLQHGLNIYNTEGTLLDRVREPILQWKLGTMMTRNNISKVYPHVV
DLKVTKCPCANDVALLGFIMDSTLDGVYIGLSFSGFWNYNDTTWYNLTDMIYSQVGEEHT
ELSVVDMVLANHFLVILTSLGLFISGDLRYPSSSVLLFSRAEFCGFERVDYIKGKLWYNE
RCFANRERFEVDYITITFERNRTLSEASSCFYSKEPFLEWLPCLPSISKRMKTIPSTVIT
FLIDQEQSSGIYLFQNQKNTTASVRIFRNNRPRLRQKFPLFSFPSSFSSPVGMVFHPRSH
FLYAYGNQVWLSVDGGNTFELLADFHDDIIKNVYHSFYTSDITFVSQSGKVYSTKAGLGR
YTEIGSISDQIFTLYYDHMGFIHKLTPDHFEASGSFGAFGNSKGIFGQAPDMGFETALAP
QHITLNEMIFYAYVPENEPQGSIYTKKFNEIHFGKVIHSRKTGTAYIREILYHDTPKGFL
SSVIAEMIDPFGIEAVHESSCLSSSLSINQAGNFFYKLSLQLQTSGDTSSFQDSDIEKTV
VIPGYSSFLITRILDNENALAIATMPGRVPNNMTFLKDSWFLYNFGQRNGRTWKIYSKPC
NYWFQQQDGSLSLNVLKYIDLGKSHSFKIKVIPNTKSVRTLEIPLLKVIVGNPNLLEVKA
KGYFDDTDSYLMEISAASKTLRQGSTSLAFIVWGASTECFVTTIVPTLKSSCSYLKSMHH
IPSEFIPLEDWNSGVHVDSQGFNMIKVLPVNYRPPSNMGIAIPLTDNFYHADPSQPIPRN
LFHKSKKSGKFKQCANASTREECNCTNNQKFSYAVGFSDCREKVPRFKFPVTQYPISLKI
YNEDGYIPVETPYLVTVAEVNNRENWKLKQSVPENVKKLKDYLGLILHAPVYNPLGLNLS
VKGSELFHFRVSVVPGVTFCNLVEEFQIYVDEAPLPFPGHTLIAVAAAVVLGGLIFIAFM
FQIHNSHPYQQLSKTDSVNLGVSAT
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggaattgctatttttatatgttatgattttacttttgaacatgtttgatttttcatca
ggaataacatataacaaaggtgatatggagaatcgctttgcttgtgctagccaaggtttc
ccccaaaagaatgaaataatcaagttgtatcttttctctgatgatttgaaaatccagtgt
tttttccagtctgaaaatgagcttacttcaagggaatttctaagcgtgttcacatcagga
ggacttgctcccagcttgggaatcataaatagtacatatacaggcatcttccactttaat
ttaactttgttcagtgatcgggtttactggttgattgatattcccagagaaaacattacc
aaaaatacagatattgcagctgtagaagaatggttagtcaggatcactttacaacacgga
ttaaatatttataatactgaaggaacgctattggatagggttcgagaacctattcttcag
tggaaacttgggactatgatgacaagaaacaacatcagtaaagtatacccacatgtggta
gatctcaaagtgacgaaatgcccttgtgccaatgatgtggccttacttggcttcattatg
gattcaactcttgatggtgtttacataggcctcagcttttctggattttggaattataat
gataccacgtggtataacctgacagacatgatctactcccaagttggagaagagcacaca
gagctttcagtggtggatatggttctagcaaatcattttttagttatcctcacctctttg
ggtctttttataagtggagatcttcgctatccatcatcctctgtcttactgttttcaagg
gcagagttttgtggtttcgaaagggttgactatatcaaaggaaaactgtggtataatgaa
agatgttttgctaacagagaacgttttgaagtcgattatattaccatcacctttgagaga
aacaggaccctaagtgaggcaagctcttgtttttatagcaaagaaccatttcttgaatgg
ctaccttgcttaccttccatttcaaaaagaatgaaaactattccatcaactgtgataaca
tttcttattgaccaagaacaaagttctggcatctacctcttccagaaccagaaaaatacc
actgcctctgtgaggatctttagaaacaacagaccaagattaagacaaaaatttcccctt
ttctcatttccttcgtcattctcttctcctgttggaatggtgttccacccacgaagccat
tttctgtatgcctatggtaatcaggtatggctttcagttgatggtggcaacacttttgaa
ttattagctgactttcatgatgacatcataaagaatgtttatcatagtttttatacttcg
gatattacttttgtttcccaaagtgggaaggtttactccacaaaggcaggattaggaaga
tatactgaaatcggatccatctctgatcagattttcacattatactatgaccacatggga
ttcatacataaactgactccagatcattttgaagctagtgggtcatttggtgcctttgga
aattctaaaggtatttttggacaggctcctgacatgggctttgagacagcccttgctccg
cagcatatcaccttaaatgaaatgatcttttatgcatatgtgcctgagaatgaacctcag
ggaagtatctacaccaagaaattcaacgagattcactttggaaaagtgatacactccagg
aaaactggaacagcttacataagagagatattgtaccatgacacccctaaaggatttttg
tcctcagttattgcagaaatgatagacccttttggaatagaggcagtacatgaaagctct
tgtttgtctagttccctttccattaatcaagctggaaatttcttctataaacttagtctt
caattacaaacttcaggtgatacgtcctcatttcaagattcagatatagagaagactgtg
gtgattcctggttacagcagcttcctgatcacaaggattttagataatgagaatgcttta
gctattgctactatgcctggaagagtacccaacaatatgacctttctgaaagactcctgg
ttcttatacaactttgggcaaaggaatggccgaacatggaagatatattcaaaaccatgt
aattactggtttcagcaacaagatggctcactgtccctcaacgtcctgaaatatattgac
ctggggaaatctcattcttttaaaattaaggtcatacctaatacaaaaagtgttcgaacc
cttgaaataccactattgaaagtaattgtgggaaacccaaatttgttggaagttaaagct
aaaggctattttgatgatactgatagttatctaatggaaatttctgcagctagcaaaact
ttacgacaaggttcaacttcactggcatttattgtctggggagcgtcgactgagtgcttt
gttacaacaatcgtgccaaccttgaaaagcagctgtagttatctcaagtctatgcatcac
atccctagtgaatttattccgttggaagactggaacagtggagttcacgtggacagtcag
ggttttaatatgatcaaagttttgccagtaaactacaggcctccctctaatatgggaatt
gctattccactcacagataatttttatcatgcagatcctagccaacctataccaagaaat
ctatttcacaagtcaaagaaatctggtaaattcaaacagtgtgctaatgcatctactcga
gaggagtgtaattgcacaaacaatcagaagttttcatatgctgttgggttctcagattgc
agagaaaaggttccccgttttaagtttccagttacacaatatccaatttctttgaaaatt
tacaatgaagatggatatatcccagtggaaacgccatacctggttactgtggctgaagta
aataacagggaaaactggaaactaaaacaatctgtgccagaaaatgtgaaaaaactgaaa
gactacttaggactgattcttcatgctccagtgtataatcctttaggcctcaatttaagt
gtaaaaggctctgagctctttcacttcagagtgtctgtcgttccaggggtcacgttttgt
aacttagttgaagaatttcagatttatgtcgatgaagcacctctgccgtttcctggacac
acacttattgccgttgcagcagctgtagtgctggggggattaatttttatagcatttatg
ttccaaatacataacagccacccataccaacaactgtctaaaacagacagtgtgaactta
ggtgtcagtgccacctag
DBGET
integrated database retrieval system