Sus scrofa (pig): 100512506
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Entry
100512506 CDS
T01009
Symbol
CRNKL1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100512506 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
100512506 (CRNKL1)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100512506 (CRNKL1)
Spliceosome [BR:
ssc03041
]
Complex B
Other components
Prp19-related factors
100512506 (CRNKL1)
Complex C
100512506 (CRNKL1)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
100512506 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT
TPR_14
TPR_19
Suf
TPR_17
Mad3_BUB1_I
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
100512506
NCBI-ProteinID:
XP_020933074
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All DBs
Position
17:complement(28079541..28111871)
Genome browser
AA seq
693 aa
AA seq
DB search
MAASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELN
DYKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLK
YAEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWQP
EEQAWHSYINFELRYKEVDRARTIYERFVLVHPDVKNWIKYARFEEKHGYFAHARKVYER
AVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKK
FGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAIANV
PPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQ
FEIRQKNLPFARRALGTSIGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFGPENCT
SWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQEETERTRNLYRR
LLQRTQHVKVWISFAQFELSSGKEGSLAKCRQIYEEANKTMRNCEEKEERLMLLESWRSF
EDEFGTVSDKERVDKLMPEKVKKRRKVQADDGSDAGWEEYYDYIFPEDAANQPNLKLLAM
AKLWKKQQQEKEAGEQDPDKDIAESESGPSCSC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccaccgcggccgggaagcagaggatcccgaaagtggccaaggtgaaaaac
aaagccccagctgaggtacagataactgcagaacaactgctaagagaagctaaggaaaga
gaacttgagcttcttccacctccccctcaacagaagatcacagatgaagaggagttaaat
gattacaaactaaggaagaggaagacttttgaagataacataaggaaaaacaggactgta
attagtaactggataaaatatgcacaatgggaagaaagtctaaaggagattcaaagggct
cggtccatatacgaacgtgctttagacgtggactatcggaatatcacactctggctgaaa
tatgcagagatggaaatgaagaatcgccaggtcaaccatgcccggaatatctgggaccgg
gccataacaactctgcctcgagtcaaccagttctggtacaagtacacatacatggaggag
atgctggggaacattgccggggcccggcaggtgttcgagcgctggatggagtggcagcct
gaggagcaggcctggcactcctacatcaacttcgagctgagatacaaagaggtggaccgg
gcccgcaccatttatgagcgatttgttctcgtgcaccccgatgtgaagaactggatcaag
tacgcccgttttgaagaaaaacatggttattttgcccacgcacggaaagtgtatgagaga
gctgtcgaattctttggggatgaacacatggatgaacacctttatgttgcctttgccaag
tttgaagaaaatcagaaagaatttgagagggtacgagtcatctacaagtacgccctggat
cgaatttcaaagcaagaggcccaggaactctttaaaaattacaccatctttgagaagaag
tttggtgacaggcggggcattgaagacatcatcgtgagcaaacggagattccagtatgag
gaggaagtgaaggctaacccgcacaactacgacgcttggtttgattacttgcgcttggtg
gagagtgacgccgaagcagagactgtgcgagaagtgtatgagcgtgccatcgccaacgtc
ccgcccatccaggagaagaggcactggaagcgctacatctatctttgggtcaactacgcc
ctgtatgaggagctggaggcaaaggatcccgagaggacaagacaggtttaccaagcctct
ttggaactcattcctcataaaaagttcacatttgccaaaatgtggttgctatatgcacaa
tttgaaataaggcagaaaaatttaccatttgccagaagagctttgggaacttccataggc
aagtgtccgaagaacaagttgtttaaaggttacatagaattggagctacagcttcgagaa
tttgacagatgccggaagctttatgaaaagttcctggaatttggacctgaaaattgtacc
tcttggattaaatttgcagaattagagacgatccttggagatattgagagagcccgggcc
atctatgagttagccatcagtcagccacgcttggacatgccagaggtgctttggaaatca
tatattgattttgaaattgagcaggaggaaaccgaacgaacacgaaatctttaccgacgg
ttgcttcaacggacacagcatgtcaaggtatggatcagttttgcgcagtttgaattgtct
tcagggaaagaaggaagcttggctaaatgcagacagatctatgaagaggctaacaaaacc
atgcgaaactgtgaggaaaaggaagagagacttatgctgctggaatcttggcgaagcttt
gaagatgaatttggaacagtatcggataaggagagagtcgacaaactcatgccagagaag
gtcaagaagagaagaaaggtccaggctgatgacgggtctgatgcaggctgggaagagtac
tatgattacatcttcccagaagatgctgccaaccaacccaacctcaaactcctggccatg
gccaaactctggaagaaacagcaacaggaaaaggaggctggtgagcaagacccagataaa
gacatcgctgagagtgaatccggaccctcttgttcgtgttaa
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