Sus scrofa (pig): 100517309
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Entry
100517309 CDS
T01009
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X2
KO
K12842
U2-associated protein SR140
Organism
ssc
Sus scrofa (pig)
Pathway
ssc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100517309 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
100517309 (U2SURP)
Spliceosome [BR:
ssc03041
]
Complex A
U2 snRNP components
U2 related factors
100517309 (U2SURP)
Complex B
100517309 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
100517309
NCBI-ProteinID:
XP_013837561
Ensembl:
ENSSSCG00000011684
UniProt:
A0A480VB01
LinkDB
All DBs
Position
13:83704501..83759800
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AA seq
1028 aa
AA seq
DB search
MADKTPGGSQKASSKTRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESA
RESLCDSPHQNLSKPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEF
LAAFEGSDGNKVKTFVRGGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPP
SLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDG
QRRSMDAPSRRNRSSVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLA
SVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPH
PIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVI
PTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSIL
QGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRDK
LEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDV
LYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWA
IYPEPFLIKLQNIFLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPI
DDLDGVPIKSLDDDLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWEL
FDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKR
AKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKD
KEKLESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSH
KESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSH
KKSKKNKH
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccaggcggctctcagaaggccagttcaaagaccagatcatcagat
gttcattcatctggatcttcagatgcacatatggatgcatctggaccctcagatagtgat
atgccaagtcggacacgacctaagagcccaagaaaacataattataggaatgagagtgcc
cgtgaaagtctttgtgattctcctcatcagaatctctcaaaacctcttctggaaaacaaa
cttaaagcattcagtattggaaaaatgagtacagctaagcgaactttaagtaagaaggag
caagaggaattaaagaagaaggaggatgaaaaggcagctgctgagatttatgaggaattt
cttgctgcttttgaaggaagtgatggtaataaagtgaaaacatttgtgcgtggaggtgtt
gttaatgcagctaaagaagaacatgaaacagatgaaaaaagaggaaaaatctataagcca
tcttcaagatttgcagatcaaaaaaaccctccaaatcagtcatccaatgaaagaccacca
tctcttcttgtgatagaaaccaaaaaacctccactgaagaaaggggagaaagaaaagaaa
aaaagcaatttggaactcttcaaagaagaattgaaacaaattcaagaagagcgtgatgag
agacataagacaaaaggcaggttaagtcgatttgagccacctcagtcagattctgatggt
cagcgtcgttctatggatgcgccttcaagaagaaatagatcatctgttcttgatgattat
gcacctggttcacatgatgtaggagatccaagcactactaatttatacctcggaaacatt
aatccacagatgaatgaagaaatgttgtgccaagaatttggaagatttggaccattagcc
agtgtgaaaattatgtggcctagaactgatgaagaaagagcaagagagagaaattgtggc
tttgtggcctttatgaatagaagagatgctgaaagagctttaaaaaatttaaatggaaag
atgattatgtcttttgaaatgaagttaggttggggtaaagctgtgcctattcctccacat
cccatatacattccgccttctatgatggaacacacacttcctccacctccatcaggactg
cctttcaatgcacagcctagagagcggttaaaaaaccccaatgctcccatgttaccacca
cctaaaaacaaggaggattttgagaagactctgtcgcaagccatagtcaaagtggttatc
ccaacagaaaggaatttgctcgccctgatacatcgaatgatagagtttgttgtacgtgaa
gggccaatgttcgaagctatgattatgaacagagagatcaacaatcctatgttcagattc
ttatttgaaaaccagacaccagcccatgtttactataggtggaagctttattctattctg
cagggagattctccaactaagtggcggacggaagattttcgtatgttcaaaaatggatcg
ttttggaggccaccaccattaaatccatacctgcatgggatgtcagaagagcaggaaaca
gaagcttttgtggaggagcctagtaaaaagggagcacttaaggaagaacagagggacaaa
ttagaagaaattctgcgggggttaacgccaaggaaaaatgatattggagatgcaatggtt
ttctgtcttaataatgctgaagctgctgaagaaatagtagattgcattactgagtcattg
tccatcttaaagacaccccttcccaaaaagattgccagattatatttggtttctgatgtg
ttatacaactcttcagccaaagttgccaatgcttcctattatagaaaattttttgaaaca
aagttatgtcagatattttcagacctcaatgctacctatcgtacaattcaaggccattta
cagtctgaaaacttcaagcaacgggtaatgacctgctttagagcgtgggaagattgggca
atttatccagaaccatttttgatcaaactacaaaatattttcttaggacttgtaaatatt
attgaagaaaaggaaacagaggatgtaccagatgaccttgatggtgcccccattgaggaa
gagcttgatggtgcacctctagaagatgtggatggaattcctattgatgctactcccatt
gatgatcttgatggagtccctataaaaagtcttgatgatgatcttgatggagtgcctttg
gatgcaactgaagactcaaagaagaatgagcctatatttaaagttgccccgtcaaaatgg
gaagctgtagatgaatctgaattggaagcacaggctgtaacaacttctaaatgggagtta
tttgaccagcatgaagaatcagaagaagaagaaaatcaaaatcaagaagaagaaagtgaa
gatgaagaagatactcaaagttccaaatctgaagaacatcatttgtactctaatccaatc
aaagaagaaatgactgagtccaagttctcaaagtactctgaaatgagtgaggaaaaacga
gctaaactccgtgaaattgagctcaaagttatgaagtttcaggatgaattggaatctgga
aaaagacccaaaaaaccaggccagagctttcaggagcaagtagaacactacagagataaa
cttcttcaacgggagaaagagaaagaattagaaagagaacgagaaagagataagaaggat
aaagaaaaattggaatctcgatccaaagacaagaaagaaaaagatgagtgtactccaaca
agaaaagaaaggaaaaggcgacacagtacgtcccctagcccatctcgcagtagcagtggt
agacgagtgaaatccccatcaccaaaatcggagcgatcagagcgttcagaaagatctcat
aaagagagctcacggtccaggtcatctcacaaagattctcctagagatgttagcaaaaag
gccaaaagatcaccatctggttcaaggacacctaaaaggtctaggcgatcacggtctaga
tcccctaaaaaatcagggaagaaatccagatcccagtcccgatctccacacaggtctcat
aaaaagtcaaagaaaaacaaacactga
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