Sus scrofa (pig): 100518559
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Entry
100518559 CDS
T01009
Symbol
PRDM2
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc00310
Lysine degradation
ssc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100518559 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssc03000
]
100518559 (PRDM2)
03036 Chromosome and associated proteins [BR:
ssc03036
]
100518559 (PRDM2)
Enzymes [BR:
ssc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
100518559 (PRDM2)
Transcription factors [BR:
ssc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100518559 (PRDM2)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100518559 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-H2C2_2
AAT
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
100518559
NCBI-ProteinID:
XP_020953220
LinkDB
All DBs
Position
6:73135872..73240271
Genome browser
AA seq
1710 aa
AA seq
DB search
MNQNAAEPVAAAETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFV
GDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINR
AIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQENKN
KANKTEDTQLKTSEPDSSSANMRDSAEGPQDEDEKPSASAVEQPAVPQEAGSQDVLPERE
VPAPACEPQTGPEAELEATRCEANDVEEEEEEEEEEEEELEDEGDTVADVPNESSPKEPE
IRCDEKPEDLLEEPKALLKETPEASPEVTPVSTVPRAKEEANGDVFETFLFPCQHCERKF
TTKQGLERHTHIHLSTVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKPSLTPPQPED
PADGLALGDAAAPREDAPPPALGQDCLALHSEKASQETVRSSVAEENGDVKELHPCKYCK
KVFGTHTNMRRHQRRVHERHLIPKGVRRKGGLLEEPRXPAGQAPPAQSVYVPSTEPEEEG
EADDVYIMDISSNISENLNYYIDGKIPTSSSTSNCDVIEMESGPADVYGINCLLAPVTVE
ITQNIKTTQAPVTDDLPKEPSSSTNSESKKRRTTSPPVLPKIKAEAESEPVAASCSLSLP
LSIATTEAVSFHKEKNVYLSSKLKQLLQTQEKLTPPAGISAAEIPKLGPVCVSAPASMLP
VTSSRFKRRTSSPPSSPQHSPALRDFGKPGDGKATWTEAVLSSKKPKLESHSNSPAWSLS
GRDERETGSPPGFDDYKVPKEWAASSSFSNVCNQQPLDLSSGVKQKAEGTGKMPVQWESV
LDLSVHKKPCSDSEGKEFKENHLVQPACNAAKKKKPTTCMLQKVLLNEYNGVDLPVENAP
DVTRSPSPCKPPDPHPDPDLLGPDSGLSAPAAESPPEVSPRSPAPQTSSLSSGQLPPLLT
PTNPSSPPPCPPVLTVATPPPPLLPTLPLPAASSGTSPHACPSPLSNAAAQSPLPILSPT
VSPSPSPIPSVEPLPSAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSAVSSVVSS
GDNLEASLPMISFKQEELENEDLKAREEAQAAAERAVVQETFNKNFVCNVCESPFLSIKD
LTKHLSVHAEDWPFKCEFCVQLFKAKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQ
HQRDLHPDEACTHHEFESGTLRPQNFTDPSKARAEHMQGLPEDPLETSKEEEELNDSSEE
LYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHHRSPLGIGVTATNFTTHNIPQT
FTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDN
AGKNAFRRMGQPKRLNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSAKQKADLKH
APEAASHICPYCSREFTYIGSLNKHAAFSCPKKPLSPSKKKVSHSSKKGGHPSPAGSDKS
SSSSSHRRRTADAEIKMQSVQAPLGKTRARSSGPTSLPPPASSFRSKQNVKFAASVKSKK
PSSSLRNSSPIRMAKVTHSEAKKPKAAAKNHAAQLSGKTSRSLHVRAQKSRAVLQSKSAL
ASKKRTDRFNVKSRERSGGPITRSLQLAAAADPSESRREDSGGKQELKDLSYSLRLASRC
PPPAASYITRQCRNVKATAAAQFQGSLFKE
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacgcagctgagcctgtggcagccgccgagaccctggccgaggtgcctgaa
catgtgcttcgaggacttccggaggaagtgaggcttttcccatctgctgttgacaagact
cggattggtgtctgggccactaaaccaattttaaaaggcaaaaagtttgggccatttgtc
ggtgataagaaaaaaaggtctcaggttaagaataatgtatacatgtgggaggtctattac
ccaaatttgggatggatgtgcattgatgccactgatccagagaaggggaactggctgcgc
tatgtgaattgggcttgctcaggagaagagcagaatttatttccactggaaatcaacagg
gccatttactataaaactttaaagccaatcgcgccgggcgaggagctcctggtctggtac
aatggggaagacaaccccgagatagcagctgcgattgaggaagagcgagccagcgcccgg
agcaagcggagctccccgaaaagcaggaaagggaagaaaaaatcccaagagaataaaaac
aaagcaaacaaaaccgaagatacacaactgaagacaagtgagccagattccagctctgca
aatatgagagattctgcggaaggcccccaagacgaagacgagaagccttcagcctctgcc
gtcgagcagccggccgtcccgcaggaggctggcagtcaggatgtgcttccagagcgtgag
gtccctgcccctgcctgcgagcctcagactggaccagaagcggagctggaagcaacgcgt
tgtgaggccaatgatgtggaggaggaggaggaggaggaagaggaggaagaggaggagctg
gaagacgagggggacacagtagctgacgtgccaaatgaaagttccccaaaggagcctgag
atacggtgtgacgagaagccagaggatttattagaagaaccaaaagcgcttttgaaggaa
actcccgaggcctccccagaggtaacccctgttagcaccgttcccagagctaaagaggag
gccaacggagacgtgttcgaaacgttcctgtttccgtgtcagcactgcgagaggaagttc
accaccaaacaggggctggagcggcacacgcacatccacctgtccaccgtcaaccacgcc
ttcaagtgcaagtactgcggcaaggccttcggcacgcagatcaacaggaggcggcacgag
cggcgccacgaggcggggctgaagcggaagcccagcctgacgccgccgcagcccgaggac
cccgccgacggcctggcgctcggggacgcggccgcccccagggaggacgcgcctcctccc
gcgcttgggcaagactgtctagccttgcattcggagaaagcctcgcaagaaacggtccgt
tcctccgttgcagaagagaacggggacgtcaaagagctgcatccgtgcaaatactgtaag
aaggtttttgggactcacaccaacatgcggcggcaccagcgccgagtgcacgagcgccat
ctcatccccaagggcgtgcggcggaaaggcggcctcctggaggagccgcggnccccggcc
gggcaggcgccccctgcccagagcgtctacgtgcccagcacggagccggaggaggagggg
gaggcggacgacgtgtacatcatggacatctccagcaacatctccgaaaacctcaattac
tacatcgacggcaagattcccaccagcagcagcacgagtaactgtgacgtcattgagatg
gaatccggccccgcagacgtgtacggcataaactgtctgctggcgcccgttaccgtggaa
attactcaaaacataaagaccacacaggcccctgtcacagatgatcttcctaaggagcct
tccagcagcacaaacagtgagtccaagaagcgcagaaccactagtcctcctgtgttaccc
aagatcaaagctgaagccgagtcagagccggtagctgcctcctgctccttgagcctgccc
ctcagcatagcgacgacagaggccgtgtccttccacaaagagaaaaacgtgtatttgtca
tcgaagctcaaacagcttcttcaaacccaggagaaactaactccccccgcagggatttca
gccgctgagatacccaagttgggccctgtctgcgtgtccgctcctgcctcgatgctgcct
gtgacctcgagcaggtttaagaggcggaccagctctccgcccagctctccccagcacagt
cctgccctccgagacttcggaaagccaggtgacgggaaagccacgtggacggaggcagtt
ctaagctccaaaaagcccaaattggaaagtcatagcaactccccagcctggagtttgtct
gggagagacgagagggaaactgggagcccgccaggctttgatgactataaagtacctaaa
gagtgggcagctagttcttcctttagcaatgtgtgcaaccagcagccgctggatttatcg
agcggtgtaaaacagaaggctgagggtacgggcaagatgccggtccagtgggagtctgtg
ttggatctcagcgtgcataaaaagccttgcagtgactccgaaggcaaggagttcaaagag
aatcacttggtgcagccagcctgcaatgccgcaaagaaaaagaagccaaccacttgcatg
ctgcagaaggttcttctcaatgaatacaacggcgtcgatttacctgtagaaaatgctccg
gatgtgaccaggagccccagtccttgtaaacccccagatccccatccggatcctgacctc
cttggtcctgactctggtttatctgccccagctgctgagtctcctcctgaggtttctcct
cggtcacctgccccgcagacgtcttccctttcttctgggcagctgccgcctctcttgacc
ccaaccaatccctcttcccctccaccctgtcctcctgtgttaaccgtggccacgccaccc
cctcccctgcttcctactctccctcttccagccgcctcctccgggacatcccctcatgcc
tgtccttctcctctctcgaatgccgccgcccagtccccgcttccgattctgtccccgacg
gtgtctccctcgccgtctcccattccttccgtggagccccttccgtctgctgcttcacct
gggcctccgaccctctcttcgtcctcctcctcctcctcctcatcttccttctcttcgtcg
tcgtcctcctcctccccctcaccacctcccctctccgcagtctcctccgtggtgtcctca
ggggataacctggaagcctctctccccatgatctctttcaagcaggaggagttagagaac
gaggatctgaaagccagggaagaagcccaggctgccgcggagcgggctgtcgttcaggag
acattcaacaaaaactttgtctgcaacgtctgtgaatcgccttttctttccattaaagat
ctaaccaaacatttatccgttcatgctgaagactggcccttcaaatgtgaattttgtgtg
cagctctttaaggctaaaactgatttgtcagaacatcgctttttgcttcatggagtgggg
aatatctttgtgtgttcggtttgtaaaaaagaatttgcttttttgtgcaatttgcagcag
caccagcgcgacctccacccagatgaggcgtgcacacaccacgagtttgaaagtggcacc
ctgaggccccagaactttacagaccccagcaaggcacgtgcggagcacatgcagggtttg
ccggaagatcctttggaaacatctaaggaagaagaggagttgaacgattcttccgaagag
ctttacacaaccataaaaataatggcttctggaataaagacgaaagatccggatgtccga
ttgggtctcaatcagcattacccgagctttaaaccgcctccatttcagtaccatcaccgc
agccccctgggcattggcgtgacggccacaaatttcacgacacacaacatcccacagacg
tttaccaccgccatccgctgcaccaagtgtgggaagggtgtggacaacatgcccgagctg
cacaaacacatcctggcgtgtgcttccgctagcgacaagaagaggtacacccccaagaag
aaccccgtcccgttgaagcagaccgtgcagcccaaaaacggcgtggtggttttggacaac
gccgggaagaatgccttcagacgcatggggcagcccaaaaggctgaacttcagcgtcgag
ctcagcaagatgtcctcgaataagctcaaattaaatgcgttgaagaaaaaaaaccagctt
gtccagaaagcaatccttcaaaaaaacaaatctgccaagcagaaggccgacctaaaacat
gcccccgaggccgcctcgcacatctgcccgtactgcagccgagagttcacatacatcggc
agcctgaacaagcacgccgccttcagctgtcccaaaaagcctctttccccttccaaaaaa
aaagtttcccattcatccaagaaaggtgggcatccatcccctgcgggtagtgacaaaagc
agcagcagcagcagccaccgcaggcggaccgcggatgcggagattaaaatgcagagcgtg
caggcgcccctgggcaagaccagagcccgcagctcgggccccacgtcgctcccgccacct
gcctcgtccttcaggtccaagcagaatgttaagttcgcagcttcggttaagtccaaaaaa
ccaagctcctctttaaggaactcaagcccgatccgaatggccaaagtgactcacagcgag
gccaagaaacccaaagctgcagccaagaaccacgccgcccagctctcgggcaagacgtct
cggagcctacacgtgagggcacagaaaagccgggctgtcctacagagcaagtcggccctg
gctagtaagaaaagaacagaccggttcaatgtcaaatctagagaacggagcggtgggccg
atcacccgcagcctgcagctggcagccgctgcagaccccagcgagagcaggagggaggac
agcgggggcaagcaggagctgaaggacttgagctacagtctccgcctggcgtcccggtgt
cctccgccagcggcctcgtacatcaccaggcagtgtaggaatgtcaaggccacagcggca
gcccagttccagggatccctcttcaaagagtag
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integrated database retrieval system
