Sus scrofa (pig): 100519588
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Entry
100519588 CDS
T01009
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssc01002
]
100519588 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100519588 (USP47)
Enzymes [BR:
ssc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100519588 (USP47)
Peptidases and inhibitors [BR:
ssc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100519588 (USP47)
Ubiquitin system [BR:
ssc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100519588 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
100519588
NCBI-ProteinID:
XP_020938973
Ensembl:
ENSSSCG00000013402
ENSSSCG00000021199
LinkDB
All DBs
Position
2:complement(47449162..47583893)
Genome browser
AA seq
1379 aa
AA seq
DB search
MFCHTQQDVYITYVRIQPSFFPLGNRNLHSKEVWREQIENAAEEPRVLCIIQDTTNSKTV
NERITLNLPASTPLRKLFEDVANKVGYINGTFDLVWGNGINTADMAPLDHTSDKSLLDAN
FEPGKKNFLHLTDKDGEQPQILLEDSSTGDDSVHDKFIGPLPREGSVGSTSDYVSQSYSY
SSILNKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVMSIPYQL
QRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEIL
DGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELD
MSTFIDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLENNSGTEKIS
KPGLEKNSLIYELFSVMVHSGSAAGGHYYACIKSFSDEQWYSFNDQHVSRITQEDIKKTH
GGSSGSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLEVDEYPEHIKNLVQRERELEEQE
KRQREIERNTCKIKLFCLHPVKQIMMENKLEVHKDKTLKEAVEMAYKMMDLEEVIPMDCC
RLVKYDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQVFQSYKPGEVMV
KVHVVDLKAESVAAPITVRAYLNQTVTEFKQLISKAIHLPAETMRIVLERCYNDLRLLTV
PSKTLKAEGFFRSNKVFVESSETVDHQMAFTDSHLWKLLDRHANTIRLFVLLPEQSPGSY
SKRTAYQKAGGDSGNVDDDCERVKGPAGSLKSVEAILEESTEKLKSLSLQQQQEGDNGDS
SKSTETSDFENIESPLNERDSSASVDNRELEQHIPTSDPENFQSEERSDSDVNNDRSTSS
VDSDILSSSHSSDTLCNADNAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTD
SEYDESGKSRGEIQYMYFKAEPYAADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVL
SSHFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEQE
PCKFLLDAVFAKGMTVRQSKEELIPQLREQCGLELSIDRFRLRKKTWKNPGTVFLDYHIY
EEDINISSNWEVFLEVLDGVEKMKSMSQLAVLSRRWRPSEMKLDPFQEVVLESSSVDELR
EKLCEISGIPLEDIEFAKGRGTFPCDISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIF
YRDKTEELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtcatacacaacaggacgtgtatataacttacgtaagaatacagccatctttt
tttccccttggtaatagaaatctgcactcaaaagaagtttggagagaacagatagaaaat
gctgctgaagaacctagagtcttatgtataatacaagatactactaattcaaagacagta
aatgaacggatcactttaaatttaccagcttctactccactcagaaagctctttgaagat
gtggccaacaaagtaggctacataaatggaacctttgatttggtctggggaaatggaatc
aatacagctgatatggctccactggatcataccagtgacaagtctcttcttgatgctaat
tttgagccagggaagaagaattttctgcatttgacagataaagatggtgaacaacctcaa
atactgctggaggattccagtactggggatgacagcgttcatgacaaatttataggtcca
cttccaagagaaggttctgtgggctctactagtgattatgtcagccaaagctactcctat
tcatctatcttgaataagtcagaaactggatatgtgggattggtaaaccaagcaatgact
tgctatttgaatagccttttacaaacactttttatgactcctgaatttaggaatgcatta
tataagtgggaatttgaagaatctgaagaagatccagtgatgagtatcccataccaactt
caaaggctttttgttttgttacaaaccagcaaaaagagagcaatcgaaaccacagatgtt
acaaggagctttggatgggatagtagtgaggcttggcagcagcatgatgtacaggaacta
tgtagagtcatgtttgatgctttggaacagaagtggaagcaaacagaacaggctgatctt
ataaatgaactgtatcaaggcaagctgaaggactacgtgagatgtctggaatgtggttat
gagggctggagaatcgacacatatcttgatattccattggtcatccgaccttatgggtcc
agccaagcatttgctagtgtggaagaagcattgcatgcatttatacagccagagatccta
gacggcccaaatcaatatttttgtgaacgttgtaagaagaagtgtgatgcacgaaagggt
cttcggtttttgcatttcccttatctgctgaccttacaattgaaaagatttgattttgat
tatacaaccatgcacaggattaaattgaatgatcggatgacatttccagaggagctagat
atgagtacatttattgatgttgaagatgagaaatctccccagactgaaagttgcactgac
agtggagcagaaaatgaaggcagttgtcacagtgatcaaatgagcaatgatttctccaat
gatgatggtgtagatgaagggatctgccttgaaaacaatagtggaactgaaaagatttca
aagcctggacttgaaaagaattctttgatctatgagctcttctccgttatggttcattca
gggagtgccgctggtggtcattattatgcttgtataaagtcattcagtgatgaacagtgg
tatagcttcaatgatcaacatgtcagcaggatcacacaagaagatattaagaaaacacat
ggtggatcttcaggaagcagaggatattactccagtgcttttgcaagctccacaaatgca
tatatgctgatatatagactgaaggatccagcaagaaatgcaaaatttctagaagtagat
gaatatccagaacatattaaaaacttggtgcagagagagagagaattggaagaacaagag
aagaggcaacgggaaattgaacgtaacacatgcaagataaaattattctgtttgcatcct
gtgaaacaaataatgatggaaaataaattggaggttcataaggataagacattaaaggaa
gcagtagaaatggcttataagatgatggatttagaagaggtaatacccatggattgctgt
cgccttgttaaatatgatgagtttcatgattatcttgaaagatcatatgaaggagaagaa
gatacaccaatgggacttttactaggtggagtcaagtcaacatacatgtttgatctgttg
ttggagacaagaagacctgatcaagttttccagtcctataaacctggagaagtgatggtg
aaagttcatgttgttgatctaaaggcagaatctgtagctgctcctatcactgttcgagct
tacttaaatcaaacagttacagagttcaaacaacttatttcaaaggccatccatttacct
gctgaaacaatgagaatagtgctggaacgctgctacaatgatttgcgtcttctcactgtg
cccagtaaaaccctgaaagctgaagggttttttagaagtaacaaggtgtttgttgaaagt
tctgagactgtggatcaccagatggcctttacagactctcatttatggaaactcctggat
cgacatgcaaatacaatcagattatttgttttgttacctgaacaatccccaggatcttat
tccaaaaggacagcataccagaaagctgggggtgattctggcaatgtggatgatgactgt
gaaagagtcaaaggacctgccgggagcctaaagtctgtggaagctattctagaagaaagc
actgaaaaactaaaaagtttgtcgctgcagcagcagcaggagggagataatggggacagc
agcaaaagtactgagactagtgactttgaaaacattgaatcacctctcaatgagagggac
tcttccgcatccgtggataatagagaacttgaacagcatattccaacttctgatcctgaa
aattttcaatctgaagaacgatcagactcagatgtcaataatgacaggagtacaagttca
gtggacagtgatattcttagctccagtcatagcagtgatactttgtgcaatgcagataat
gcccaaatccctttggcaaatggacttgactctcatagcatcacaagtagtaggagaact
aaagcaaatgaagggaaaaaggagacatgggatacagcagaagaagactctggaacggac
agtgaatatgatgagagtggcaagagtaggggagaaatacagtacatgtatttcaaagca
gagccctatgctgcagatgaaggttctggggaaggacataaatggttgatggtgcatgtt
gataaaagaattactctggccgctttcaaacaacacttagagccctttgttggagttttg
tcctctcacttcaaggtctttcgcgtgtatgccagcaatcaagagtttgagagcgtccgg
ctgaatgagacactttcatcattttcagatgacaataagattacaattagactggggaga
gcacttaaaaaaggagaatacagagttaaagtgtaccagcttctagtcaatgaacaagag
ccctgcaagtttctgctagatgctgtgtttgctaaaggaatgactgtacggcaatcgaaa
gaggagttaattcctcaactcagggagcagtgtggtttagagctcagtattgacaggttt
cgtctaaggaaaaaaacatggaagaatcctggcactgtctttttggattatcatatttat
gaagaagatattaatatttccagcaactgggaggttttccttgaagttcttgatggggtg
gagaagatgaaatccatgtcccaacttgcggttttgtcaagacggtggaggccttcagaa
atgaagttggatcccttccaggaggttgtgttggaaagcagcagtgtcgatgagttgcga
gagaagctttgtgagattagtggaattcctttggaagatattgaatttgccaagggtaga
ggaacttttccctgtgatatttctgtccttgatattcatcaggatttggactggaatcct
aaagtttctaccctgaatgtctggcctctttatatctgtgatgatggtgcagtcatattt
tatagggataaaacagaagaattaatggagttgacagatgagcaaagaaatgaactgatg
aaaaaagaaagcagtcgactccagaagacgggacatcgtgtaacgtactcacctcggaaa
gagaaagcactaaaaatatatctggatggagcaccaaataaagatctgactcaagactga
DBGET
integrated database retrieval system
