Sus scrofa (pig): 100519985
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Entry
100519985 CDS
T01009
Symbol
RBCK1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04217
Necroptosis
ssc04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100519985 (RBCK1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100519985 (RBCK1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssc04121
]
100519985 (RBCK1)
Enzymes [BR:
ssc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
100519985 (RBCK1)
Ubiquitin system [BR:
ssc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
100519985 (RBCK1)
Multi subunit Ring-finger type E3
LUBAC complex
100519985 (RBCK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_2
IBR
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-RanBP
zf-RING_11
zf-C3HC4_4
ubiquitin
YebG
Motif
Other DBs
NCBI-GeneID:
100519985
NCBI-ProteinID:
XP_020933945
LinkDB
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Position
17:complement(34784018..34801228)
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AA seq
527 aa
AA seq
DB search
MDEKIKKAEEMAQRLTRAVAGGDEQVAMQCAIWLAEQRVPLNVQLKPEVSPTQDIRLWVS
VEDAQMHTVTIWLTVRPDMTVASLKDMVFLDYGFPPTLQQWVIGQRLARDQETLHSHGVR
RNGDSAYLYLLSACNTSLNPQELQRERQLRMLEDLGFKDLTLQPRGPLEPVPPKPGAPQE
PGRGQPDAAPEPPPMGWQCPGCTFINKPTRPGCEMCCRARPEAYQVPASYQPDEEELARL
AGEEEALRQYQQTLTLTLTRPTALPPCAQRKQQQQEGNYLQHVQLDQRSLVLNTEPTECP
VCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEVACPFIDNTYSCSGKLLEREIRA
LLSPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDVNEFTCPVCFHVNCLLCK
AIHEQMNCKEYQDDLALRAQNDVAARQTTEMLRTMLQQGEAMHCPQCQIVVQKKDGCDWI
RCTVCHTEICWVTKGPRWGPGGPGDTSAGCRCRVNGIPCHPSCQNCH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaagatcaagaaagccgaggagatggcccagaggctcacccgagcagtggct
ggtggggatgaacaggtagctatgcagtgtgccatctggctggcagagcagcgggtgccc
ctgaatgtgcaactgaagcctgaggtctccccgacacaggacatcaggctgtgggtgagc
gtggaggatgcacagatgcacacggtcactatctggctcacagtgcgtcctgacatgacg
gtggcctccctcaaggacatggtgttcctggactacggcttcccgccaaccctgcagcag
tgggtgattgggcagcggctggctcgggaccaggagaccctgcactcccacggggtgcgg
cggaacggggacagcgcctacctctatctgctgtcagcctgcaacacctcactcaaccct
caggagctgcagcgggagcggcagttgcggatgctggaagatctgggcttcaaggacctc
acgctgcagccacggggccccctggagccggttcccccgaagcccggggccccccaggag
cccgggcgggggcagcccgatgccgcgccggagcccccgccgatgggctggcagtgcccc
ggctgcaccttcatcaacaagcccacgcggccgggctgcgagatgtgctgccgggcgcgg
cccgaggcctaccaggtccccgcctcgtaccagccagatgaggaggagctagcgcgcctg
gccggtgaggaggaggcgctgcgccagtaccagcagaccctgaccctgaccctgacccgt
cccacggccctgcccccgtgtgcccagcggaagcagcagcagcaggaggggaactacctg
cagcacgtgcagctggatcagcggagcctggtgctgaacaccgagcccaccgagtgcccc
gtgtgttactcggtgctggcgcccggcgaggccgtggtgctgcgcgagtgtctgcacacc
ttctgcagggagtgtctgcagggcaccatccgcaacagccaggaggccgaggtcgcctgc
cccttcattgataacacctactcgtgctcgggcaagctgctggagagggagatccgggcg
ctcctgagccccgaggactaccagcggtttctggacctgggcatctccatcgcggaaaac
cgcagcgccttcagctaccactgcaagaccccggactgcaaggggtggtgcttcttcgag
gatgatgtcaatgagttcacgtgccctgtgtgtttccacgtcaactgcctgctttgcaag
gccatccacgagcagatgaactgcaaggagtaccaggacgacctggccctgcgggctcag
aatgacgtggctgcccggcagacgacagagatgctgaggaccatgctgcagcagggcgag
gccatgcactgcccacagtgccagatcgtggtgcagaagaaggacggctgtgactggatc
cgctgcactgtctgccacactgagatctgctgggtcaccaagggtccccgctggggccct
gggggccccggagacaccagtgcgggctgccgctgccgggtgaatgggattccttgccac
cccagctgtcagaattgccactga
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