Sus scrofa (pig): 100521592
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Entry
100521592 CDS
T01009
Symbol
LRRC4
Name
(RefSeq) leucine-rich repeat-containing protein 4
KO
K16351
netrin-G2 ligand
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04360
Axon guidance
ssc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100521592 (LRRC4)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100521592 (LRRC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
I-set
Ig_3
ig
V-set
LRR_9
LRRNT
Ig_2
DAG1
Ig_6
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
100521592
NCBI-ProteinID:
XP_020934293
LinkDB
All DBs
Position
18:20319317..20322875
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AA seq
660 aa
AA seq
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MKLLWQVTVHHTWNAVLLPVVYLAAQVWILCAAIAAAASAGPQNCPSVCSCSNQFSKVVC
TRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNG
LASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL
KKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSGNHFPEIRPGSFHGL
SSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNP
WNCDCDILWLAWWLREYIPTNSTCCGRCHAPLHMRGRYLVEVDQASFQCSAPFIMDAPRD
LNISEGRMAELKCRTPPMSSVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLSDTGV
YTCMVTNVAGNSNASAYLNVSTAELNTSNYSFFTTVTVETTEISPEDTTRKYKPVPTTST
GYQPAYTTSTTVLIQTTRVPKQVAVTATDTNDKMQTSLDEVMKTTKIIIGCFVAVTLLAA
AMLIVFYKLRKRHQQRSTVAAARTVEIIQVDEDLPAAAAAAAAAAASAAATAAPAGVSGE
GAVVLPTIHDHINYNTYKPAHGAHWTENSLGNSLHPTVTTISEPYIIQTHTKDKVQETQI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttgtggcaggtaactgtgcaccacacctggaatgccgtcctgctccccgtc
gtctacctcgcggcgcaagtgtggatcctgtgcgcagccatcgctgctgccgcctccgcc
gggccccagaactgcccgtcggtctgctcgtgcagtaaccagttcagcaaggtggtgtgc
acccgccggggcctctccgaggtcccgcagggtattccttccaacacccggtacctcaac
ctcatggaaaacaacatccagatgatccaggccgacaccttccgccacctccaccacctg
gaggtcctgcagctgggcaggaactccatccggcagatcgaggtgggggccttcaacggc
ctggccagcctcaacaccctggagctgtttgacaactggctgacagtcatccccagcggg
gccttcgaatacctgtccaagctgcgggagctctggcttcgcaacaaccccatagaaagc
atcccctcttacgccttcaaccgcgtgccctccctcatgcgcctggacttgggggagctc
aagaagctggagtacatctctgagggggcttttgagggactgttcaacctcaagtacctg
aacctgggcatgtgcaacattaaagacatgcccaatctcacccccctggtggggctggag
gagctggagatgtcagggaaccacttccctgagatcaggcctggctccttccatggccta
agctccctcaagaagctctgggtcatgaactcacaggtcagcttgattgagcggaacgct
tttgatgggctggcctcgctggtggaactcaacctggcccacaataacctctcttctctg
ccccatgacctcttcacccccctgaggtacctggtggagttgcacctgcaccacaatcct
tggaactgtgattgtgacatcctgtggctagcctggtggctccgggagtacatacccacc
aattccacctgctgtggccgctgtcacgctcccttgcacatgcgaggccgctacctggta
gaggtggaccaggcctccttccagtgctccgcccccttcatcatggatgctccccgggac
ctcaacatctccgaggggcggatggcggaacttaagtgtcggactccccccatgtcctcc
gtgaagtggctgctgcccaatgggacagtgctcagccacgcctcccgccacccgcggatc
tccgtcctcaacgatggcaccttgaacttttcccacgtgctgctctcagacaccggggtg
tacacatgcatggtgaccaacgtggcgggcaactccaatgcctcggcctacctcaacgtg
agcacggccgagctcaacacctccaactacagcttcttcaccaccgtcacagtggagacc
accgagatctcgcccgaggacacgacgcgcaagtacaagcctgttcctacgacgtccacg
ggttaccagccggcatacaccacctctaccacggtgctcattcagaccacccgtgtgccc
aagcaggtggcagtgaccgcgacggacaccaatgataagatgcagaccagcctggatgaa
gtcatgaagaccaccaagatcatcattggctgcttcgtggcggtgaccctgctggctgct
gccatgctgatcgtcttctacaaacttcgcaagcggcaccagcagaggagtacagtcgca
gccgcccggacagttgagatcatccaggtggatgaagacctcccggcggcggcggcggcg
gcggcggcggcggcggcatctgcggcagcaacagcagctccagccggtgtatcaggtgag
ggggcagtcgtgctgcccacaattcatgaccatattaactacaacacctacaaaccagca
cacggggcccactggacagaaaacagcctggggaactctctgcaccccacagtcaccact
atctctgaaccttatataattcagacccataccaaggacaaggtacaggaaactcaaata
tga
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