Sus scrofa (pig): 100522863
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Entry
100522863 CDS
T01009
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssc03041
]
100522863 (RBFOX1)
Spliceosome [BR:
ssc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100522863 (RBFOX1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100522863
NCBI-ProteinID:
XP_020943722
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All DBs
Position
3:complement(34938703..37209772)
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AA seq
578 aa
AA seq
DB search
MASPCGSPEDTGKLRGRDGRQRREEEDAPPEEKRLRLGLEGGSAAKEEEDAPRLGREETG
TQTGGEDRGDPLSLPYSLVEGQDYTSENPALLSGAKNSPQDPVSASLAASKAEETAQRTH
ASGTYSFLDRTPHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQPY
ASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQSHSEQSAADTSAHTV
SGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILD
VEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPY
TNGWKLNPVVGAVYGPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAA
AYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPAT
AAAYSDRNQFVFVAADEISCNTSAVTDEFMLPTPTTTHLLQPPPTALVPCPKVPAPAQTS
EELSCTLPGLCCQAAENLTASPPLLQFMFKVIVAQERK
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggccagcccttgtggcagcccagaggacacgggcaagctcagaggcagggatggccgg
cagaggcgggaggaggaggacgcccctccggaggagaagaggttgaggctggggctggaa
ggaggaagcgcagcgaaggaggaagaagacgcgccacgtctgggcagggaagagaccggc
acccagacaggtggcgaagacagaggtgatccactgtccctgccatatagcctggtcgag
ggtcaggactacacatctgaaaatccagccctcctgtccggtgccaagaacagcccacaa
gacccagtttcggcaagcctggctgccagcaaagcagaggaaactgctcaacgaactcat
gcgagtggaacttacagcttccttgatcggactccgcattcagatatcaaagcagactgc
aacacctgcgtggaaatagaagacagaaaggtttcaagacaacagatgaattgtgaaaga
gagcagctaaggggtaatcaggaagctgccgctgcccctgacacaatggctcagccttac
gcttcggctcagtttgccccccctcagaacggcatccccgcggaatacacggcccctcat
ccccaccccgcgccagagtacacgggccagaccacggtccccgagcacacgttaaacctg
tatcctccagcccagtcgcactcggagcagagtgccgcggacacgagcgcgcacaccgtc
tcgggcaccgccacacagacagatgacgcggcgcccacggatggccagccccagacacaa
ccttccgaaaacacggaaaacaagtcccagcccaagaggctgcatgtctccaacatcccc
ttccggttccgggatcccgacctccgacaaatgtttggccaatttggtaaaatcttagat
gttgaaattatttttaatgagcgaggctcaaagggatttggtttcgtaactttcgaaaat
agtgccgatgcggacagggcgagggagaaattacacggcaccgtggtagagggccgtaaa
atcgaggtaaataatgccacagcacgtgtaatgacaaataaaaagacggtcaacccttat
acaaatggctggaaattgaatccagttgtgggtgcagtctacggtcccgagttctatgca
ggcacggtgctgttgtgccaggcgaaccaggagggatcttccatgtacagtgcccccagt
tcacttgtatatacttccgcaatgcccggcttcccgtatccagccgccaccgccgcggcc
gcctaccgaggcgcgcacctgcgaggccgtggccgcaccgtgtacaacaccttccgggcc
gcagcgcccccgcccccgatcccggcctatggcggtgttgtttaccaggatggattttat
ggtgcagacatttatggtggttatgctgcgtaccgctacgcccagcccacccccgccact
gccgctgcctacagtgacagaaatcagttcgtcttcgttgcagcagatgaaatttcttgt
aacacctctgcagttacggacgagtttatgctaccgacccctaccaccacacacttgctc
cagcccccacctacggcgttggtgccatgccccaaggttccagccccagcacagacttca
gaggagctaagctgcacacttccaggcctctgctgtcaggcagctgagaatctgactgcc
tctcctcccctattacaattcatgtttaaagtcatagtcgcccaggaaagaaaatag
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