Sus scrofa (pig): 100524247
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Entry
100524247 CDS
T01009
Symbol
CASKIN1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100524247 (CASKIN1)
Membrane trafficking [BR:
ssc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
100524247 (CASKIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_4
SAM_1
Caskin-Pro-rich
Caskin-tail
SAM_2
Ank_3
Caskin1-CID
SH3_2
SH3_1
SH3_9
Motif
Other DBs
NCBI-GeneID:
100524247
NCBI-ProteinID:
XP_020942429
Ensembl:
ENSSSCG00000024664
LinkDB
All DBs
Position
3:39794400..39811381
Genome browser
AA seq
1452 aa
AA seq
DB search
MGKEQELVQAVKAEDVGTAQRLLQRPRPGKAKLLGSTKKINVNFQDPDGFSALHHAALNG
NTELITLLLEAQAAVDIKDNKGMRPLHYAAWQGRKEPMKLVLKAGSAVNIPSDEGHIPLH
LAAQHGHYDVSEMLLQHQSNPCMVDNSGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPR
PGDATDPNGTSPLHLAAKNGHIDIIRLLLQAGIDINRQTKAGTALHEAALCGKTEVVRLL
LDNGINAHVRNTYSQTALDIVHQFTTSQASKEIKQLLREASAALQVRATKDYCNNYDLTS
LNVKAGDIITVLEQHPDGRWKGCIHDNRTGNDRVGYFPSSLGEAIVKRAGSRAGAESSPL
QGGSSSGPSAPPEEIWVLRKPFAGGDRSGSLSGVAGGRSSGGHTLHAGAEGVKLLATVLS
QKPVSDSGPGDSAVKPPESSAGATRSQPPVAHAGQVYGEQPPKKLEAASEGKSAEAVGQW
LATFQLQLYAPNFISAGYDLPTISRMTPEDLTAIGVTKPGHRKKITAEISGLSIPDWLPE
RKPANLAVWLSMIGLAQYYKVLVDNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVR
KLAELQKAEYAKYEGGPVRRKAPQSLEVMTIESPPPPEPAPAECQSPKMTTFQDSELSGE
LQAAMTGPAEGAAATAAAAAAATAAATATAEKPSNHLPPTPRASMRQEPSLGGRARHMSS
SQELLGDGPPGPGSPMSRSQEYLLDEGPTPDTPQREARPSRHGHSVKRASVPPVPGKPRQ
VLPPAASHFTPPQTPTKARPASPQALGGPHGPAPATAKVKPTPQLLPPAERPMSPRSLPQ
SPTHRGFAYVLPQPVESEAGPAVPGPVPTAVPTPVPTLCLPPEAEVEPGRPKKRAHSLNR
YAASDSEPERDELLVPAAAGPYATVQRRVGRSHSVRAPAGADKNVNRSQSFAVRPRKKGP
PPPPPKRSSSAMASANLADESAPDAEAEGAGTEDGRLGVRAQRRRASDLAGSVDTGSAGS
VKSIAAMLELSSIGGGGRAARRPPEGHPVPRPASPEPGRVATVLASVKHKEAIGPDGEVV
NRRRTLSGPVTGLLATARRGPGESGGPADHGRFVEDGAARQRPRGPAKGEAGAEGPPLAR
VEASATLQRRIRAKQSQQENVKFLLTESDTVKRRPKAKERETGPEPPPPLSVYQTGTGTV
HRPLASEQAGPPELPPPPPPAEPPPSDLMQLPPLPPLDSDARKPAKPPVSPKPILAQPVP
KIQSSPTPASKKVPLPGPGSPEVKRAHGTPPPVSPKPPPPPTAPKPAKAAAGLQSGSASP
SPAPSPARQPPPALAKSASTPPPPLSASPARPPSPGAPALHVPAKPPRAAAVAAGPPAVP
DSASPGDSARQKLEETSACLAAALQAVEEKIRQEDAQGSRPSAAEEKSTGSILDDIGSMF
DDLADQLDAMLE
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagcaggagctggtgcaggcggtgaaggcggaggacgtggggaccgcgcag
aggctgctgcagaggcctcggcccgggaaggccaagctcctgggctccaccaagaagatc
aatgtcaatttccaggacccagatggcttttctgccctgcaccacgcggccctgaatggc
aacacagagttgataaccctgctgctggaggcccaggctgccgtggacatcaaggacaac
aaaggcatgcggccgctgcactatgcggcctggcagggccggaaggagcccatgaagctg
gtgctgaaggcgggctcggcagtgaacatcccgtcggatgaaggccacatccccctgcac
ttggcggcccagcatgggcactacgacgtgtctgagatgctgctccagcaccagtccaac
ccgtgcatggtggacaactcggggaagacacccctggacctcgcctgtgagttcggccgt
gtcggggtggtccagctgctcctgagcagcaacatgtgcgcggccttgctggagccccgg
ccaggggacgccacggaccccaatggcaccagccccctgcacctggcagccaagaacggc
cacattgatatcatcaggctcctcctccaagccggcatcgacatcaaccgccagaccaag
gcgggcacggccctgcacgaggctgcgctctgcgggaagacggaagtggttcggctgctg
ctggataacgggatcaatgcccatgtgaggaacacctacagccagacggccctggacatc
gtgcaccagttcaccacctcccaggccagcaaggagatcaagcagctgctgcgagaggcc
tcggcggccctgcaggtccgggcgaccaaggattactgcaacaattacgacctgaccagc
ctcaatgtcaaagccggggacattatcacagtccttgagcagcatccagatggccggtgg
aagggctgtatccatgacaacaggacaggcaacgaccgagtgggctacttcccgtcctcc
ctgggtgaggccattgtcaagcgagcaggctcccgagcaggtgctgagtctagtccactc
cagggaggcagctcatcgggcccctctgcaccccctgaagagatctgggtgctgaggaag
cctttcgcaggcggggaccgtagtggcagcttgagtggtgtggctggtggccggagcagc
gggggccacaccctgcacgcaggcgctgaaggggtcaagctcctggccacagttctctcc
cagaagcccgtctctgactccggccccggggacagcgctgtcaagcctccagagagctct
gcaggtgccacccgctcccagcctccagtggcccacgctgggcaggtctacggggagcag
ccgcctaagaagctggaggccgcctcggagggcaagagcgccgaggctgtcggccagtgg
ctggccacgttccagctgcagctctacgcccccaacttcatcagtgccggctacgacctg
cccaccatcagccgcatgacccccgaggacctcacagccatcggggtcaccaagccgggc
caccggaagaagatcactgcagagatcagcggcctgagcatccctgactggctgcctgag
cgcaaacccgcgaacctggccgtgtggctgtccatgatcggcctggcccagtactacaag
gtgctggtggacaacggctacgagaacatcgacttcatcaccgacatcacctgggaggac
ctgcaggagattggcatcaccaagctgggacaccagaagaagctgatgctggcggtgagg
aagctggccgagctgcagaaggcagagtacgccaagtatgagggcgggcccgtgcgccgg
aaggcaccacagtccctcgaagtgatgaccatcgagtcgccacccccgcccgagcctgcc
ccggctgaatgccaatctccgaagatgaccaccttccaggacagcgagctcagcggcgag
ctgcaggctgccatgactggcccggccgaaggggctgccgccactgctgctgctgctgcc
gccgccaccgccgctgccaccgccaccgccgagaagccctccaaccacctgccgcccacc
ccaagggcctccatgcggcaggagcccagcctcggtgggcgggcacgacacatgagcagt
tctcaggagctgttgggtgacgggccccctgggcctggcagtcccatgtcacgaagccag
gagtatctgctggatgaggggcccacccctgacactccccaaagggaagcccggcccagc
cgccacggccacagtgtcaagcgggccagtgtgcctccggtgcctggaaagccccggcaa
gtccttccaccagctgccagccacttcacacccccccagacgcccacaaaagcccggcca
gcctcccctcaagccctgggggggcctcacggcccagctccagccacggccaaggtgaag
cccaccccacaattgctgccaccagcagagcgacctatgtcccctcgctcgctgcctcag
tcacccacacaccgtggctttgcctacgtgctgccccagccagtggagagcgaggcaggg
ccagctgtgccagggcctgtgcccacggccgtgcccacgccggtgcctacgctctgcctg
cccccggaggccgaagtggagccagggcggcccaagaagcgcgcccacagcctgaaccgc
tatgcggcgtccgacagcgagccagagcgggatgagctgctggtgccagctgccgcgggg
ccctatgccacggtccagcggcgcgtgggccgaagccactcagtgcgagcacctgccggc
gccgacaagaacgtcaaccgcagccagtcgtttgccgttcggcctcggaagaagggcccc
cccccacccccacccaagcgctccagctcagccatggccagtgccaacctggccgacgag
tcagcgccagatgccgaggccgagggggctgggacagaggacggccggctaggggttcgg
gcacagcgccgccgggctagcgacctggctggcagtgtggacacaggcagcgccggcagc
gtgaagagcatcgcagccatgctcgagctgtcgtccattgggggtgggggccgggcagcc
cgcaggccccctgagggccaccccgtgccacgccctgccagcccagagccaggccgggtg
gccacggtgttggcctcggtgaagcacaaggaggccattgggcctgacggggaggtggtg
aaccggcgccgcacgctgagtgggcctgtcacgggacttctggccacggctcgccggggt
ccgggagagtctggggggcctgcagatcatggccgctttgtggaagacggcgctgcccgg
cagcggcctcgcggtccagccaagggcgaggcaggtgcagagggcccacccctggccagg
gtggaggccagcgccacactccagaggcgcatccgagccaagcagagccagcaggagaac
gtgaagtttctcctgacggagtccgacacggtcaagcgccggcccaaggccaaggagcgg
gagacaggtccagagcctcccccgcccctgtccgtgtaccagactggaacaggcactgtg
caccgccccctggcctctgagcaggctgggcccccagagctgcctccgccacccccaccc
gctgagcccccgccctccgacctgatgcagctgcccccgctgcccccgctggacagtgat
gcccggaagccggccaagccgcctgtctctccgaagcccattctggctcagcccgtgccc
aagatccagagctcacccacacctgcctccaagaaggtgccgctgccaggtcctggcagc
ccagaggtgaagcgcgcccacggcacgccgccgcccgtgtctcccaagccgccgccgccg
cccacggcacccaagccagccaaggccgccgcggggctgcagtcgggcagcgccagcccg
tcgcccgcgccctcgccggcgcgccagccaccccccgcgctcgccaagtctgccagcacg
ccgccgccgccgctgagcgccagccctgcgaggcccccgtcccccggtgcgcccgcgctg
cacgtgcccgccaagcctccgcgcgccgctgcagtcgccgccgggccccctgccgtgccc
gacagcgcctcgccgggggatagcgcccggcagaagctggaggagacgagcgcgtgcttg
gcggcggcgctgcaagcggtagaagagaagattcggcaggaggacgcgcaaggctcgcgc
ccctcggcggccgaggagaagagcactggcagcatcctggacgacattggcagcatgttt
gacgacctggctgaccagctggacgccatgctggagtga
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