Sus scrofa (pig): 100620812
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Entry
100620812 CDS
T01009
Symbol
AGAP1
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
ssc
Sus scrofa (pig)
Pathway
ssc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100620812 (AGAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100620812 (AGAP1)
Membrane trafficking [BR:
ssc04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
100620812 (AGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
Ank_2
PH
Ank
Ank_5
Ank_4
Ank_3
Roc
PH_6
Motif
Other DBs
NCBI-GeneID:
100620812
NCBI-ProteinID:
XP_020931189
Ensembl:
ENSSSCG00000024170
ENSSSCG00000026452
LinkDB
All DBs
Position
15:135442440..135999162
Genome browser
AA seq
1152 aa
AA seq
DB search
MYLLDGSGEPASPPADAMQRGTPPRKTVYRISVTMVRKEQLGAPGPGGPGPRPARRPRPA
RSPDAPGRLLEEAEAAAGAEDLEGRRPRAWDFRTFRTRSTGQLELGRLRPCARDPEPADL
AGSPPTVEEAPGSPAPGSPDVEGARAAPLRRSLSFRHWSGPEAPQGPALGRGRRHSSSGS
LAWAPGGEAVADPEAALEPAASAQPSSEKRNTLDVGEVLSKNDALSDLERWERSKSKNRT
LDNSDLQRLERARAAAAGPGAASEHRLLRFFSGIFARRDGAPGGGPSPRSGASRPRGYFS
SLRRAPADTHSSSAESIDGSPRRDAFVNSQEWTLSRSVPELKVGIVGNLASGKSALVHRY
LTGTYVQEESPEGGRFKKEIVVDGQSYLLLIRDEGGPPEAQFAMWVDAVIFVFSLEDEIS
FQTVYHYYSRMANYRSTSEIPLVLVGTQDAISSTNPRVIDDARARKLSSDLKRCTYYETC
ATYGLNVERVFQDVAQKIVATRKKQQLSIGPCKSLPNSPSHSSVCSAQVSAVHISQTSNG
GGSLSDYSSSVPSTPSTSQKELRIDVPPTANTPTPVRKQSKRRSNLFTSRKGSDPDKEKK
GLESRADSIGSGRAIPIKQGMLLKRSGKSLNKEWKKKYVTLCDNGVLTYHPSLHDYMQNV
HGKEIDLLRTTVKVPGKRPPRATSACAPISSPKTNGLAKDMSSLHVSPNSGNVTSAPGSQ
MASGVSLGSLSGRPDGVQQRSYSVSSADQWSEATVIANSAISSDTGLGDSVCSSPSISST
TSPKLDPPPSPHANRKKHRRKKSTSNFKADGLSGTADAKRKAWKLNRVGSLRNIYSSSST
NTEEQEENFEFIIVSLTGQTWHFEATTYEERDAWVQAIESQILASLQSCESSKNKSRLTS
QSEAMALQSIRNIRGNSHCVDCETQNPNWASLNLGALMCIECSGIHRNLGTHLSRVRSLD
LDDWPIELIKVMSSIGNELANSVWEESSQGRPKPSLDSTREEKERWIRAKYEQKLFLAPL
PCTELSLGQHLLRATADEDLRTVILLLAHGSRDEVNETCGEGDGRTALHLACRKGNVVLA
QLLIWYGVDVMARDAHGNTALAYARQASSQECIDVLLQYGCPDERFVLMATPNLSRKNNN
RGNSGGRVPTII
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgctggacggcagcggcgaacccgcgtctccgcctgcggacgcgatgcagcgc
gggacgccccccaggaagacagtctaccgcatctccgtgaccatggtcaggaaggagcag
ctgggcgctccgggccccggcggccccggcccgcgcccggctcggaggccccggcccgcg
cgctccccggacgcacccgggcggctcctggaggaggcggaggcggcagcgggcgctgag
gatctggagggccgccggccgcgcgcctgggacttccgcaccttccgcacccgcagcacc
gggcagctggagctcgggcggctccggccgtgcgcacgcgacccggagcccgcggatctg
gccggcagccccccgacggtggaggaggcgcctggctcgcccgcgcccggtagcccggac
gtggagggggcccgggccgcacccctgcggcggagcctcagcttcaggcactggagtggg
cccgaggcgccgcagggcccggccctgggccgcgggaggcgccacagcagctccgggagc
ctggcctgggcgccgggtggcgaggctgtggccgaccccgaggccgccctggagcccgcg
gcctccgcgcagccctcctcggagaagcgcaacaccctggacgtgggcgaggtgctcagc
aagaacgatgcgctctcggacctggagcgctgggagcgcagcaagagcaagaaccgcacg
ctggacaacagcgacttgcagcggctggagcgcgcgcgggcggcggccgcgggccccggc
gccgcgtcggagcaccgactgctgcgcttctttagcggcattttcgcgcgcagggacggc
gcgcccggcggcggtccttccccgcggagcggcgcctccaggccgcgcggctacttcagc
agcctgcggcgagccccggccgacacgcactcgtctagcgccgagagcatcgacgggtcg
ccgcgcagagacgcctttgtgaacagccaggaatggacgttaagtcgatccgtcccggag
ctcaaagtggggattgtgggtaacttggccagcggcaagtcggccctggtgcaccggtac
ctgaccggcacatacgtccaggaagaatcgcccgaaggtggcagattcaagaaggagatc
gttgtggacggccagagctacctgctgctgatcagagatgaagggggccccccagaggca
cagtttgccatgtgggtggacgctgtcatatttgtcttcagcttggaggacgagataagc
ttccagaccgtctaccactactacagccggatggccaactaccgcagcacgagcgagatc
cctctggtcctcgtggggacccaggatgccataagctccaccaacccgcgggtcatcgac
gacgccagggcgcggaagctctccagcgacctgaagaggtgcacgtactacgagacgtgc
gccacctacgggctgaacgtggagagggtcttccaggacgttgcccagaagattgttgcc
acaaggaagaagcagcagctgtccataggaccttgcaagtcgctccccaactccccaagc
cactcgtccgtctgttccgcacaggtgtctgccgtacacatcagccagacaagcaatggc
ggtgggagcctgagcgactattcctcctccgtcccgtccacgccgagcaccagccagaag
gagctgcgcatcgacgtcccgcccacggccaacacgcccacgcccgtccgcaagcagtcc
aagcgccgctccaacctcttcacctctcggaaagggagtgacccagacaaagagaagaaa
ggcctggagagtcgggcagacagcatcgggagcggccgagccatcccaattaaacagggc
atgctgctgaagcgaagtggcaaatcattgaacaaagaatggaaaaagaaatacgtcacc
ctgtgtgacaacggcgtgctgacctaccatccaagtttacacgactacatgcagaacgtt
catggcaaagagatcgatcttctgagaaccactgtgaaagtgccaggcaagaggcccccc
cgagccacgtccgcctgcgcgcccatctccagccccaaaaccaacggcctggccaaggac
atgagcagcttgcacgtctcaccaaattcagggaatgtcactagcgcgcctgggtctcag
atggcgagcggcgtcagcctgggctccttgagcggccgaccggacggcgtgcagcagcgc
tcctactctgtctccagtgccgaccagtggagtgaggctacggtcattgcaaactcggcc
atcagcagtgacacggggctgggcgactccgtgtgctccagccccagcatctccagcacc
accagccccaagctcgacccgcccccctccccccacgccaacagaaagaagcatcgcagg
aagaaaagcaccagcaacttcaaagccgacggcctctccggcactgctgacgccaaacgc
aaagcatggaaactaaaccgtgttggtagcctgcgaaatatttacagcagcagcagcacc
aacaccgaagaacaagaagaaaactttgagtttatcattgtgtccctcactggccagacg
tggcactttgaagccaccacatatgaggagcgggacgcgtgggtccaggccatcgagagc
cagattctcgccagcttacagtcgtgcgagagcagcaagaataagtcccgactgaccagc
cagagcgaggccatggccttgcagtcgatacggaacatccgcgggaattcccactgtgtg
gactgcgagacccagaaccccaactgggccagtttgaacttgggagccctcatgtgcatc
gagtgctcagggatccaccggaatctcggcacccacctttctcgagtccgatctctggac
ctcgacgactggcccatcgagctcatcaaggtgatgtcgtccatcgggaacgagctggcc
aacagtgtctgggaggagagcagccaggggcggcccaagccctcgctggactccacgagg
gaagagaaggagcggtggatccgggccaagtacgagcagaagctcttcctggccccgctg
ccctgcacggagctgtccctgggccagcacctgctgcgggccaccgccgacgaggacctg
cggacagtcatcttgctgctggcgcacggctcccgggacgaggtgaacgagacgtgcggg
gaaggggacggccgcacggcgctgcacctggcctgccggaagggcaacgtggtcctggcc
cagctcctcatctggtacggggtggacgtgatggcccgcgacgcgcacgggaacacggcg
ctggcctacgcgcggcaggcctccagccaggagtgcatcgacgtcctgctgcagtacggc
tgccccgacgaacgcttcgtgctcatggccacccccaacctgtccaggaagaacaacaac
cggggcaacagcggcgggagggtccccaccatcatctga
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