Sus scrofa (pig): 100621314
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Entry
100621314 CDS
T01009
Symbol
RPGR
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator isoform X1
KO
K19607
X-linked retinitis pigmentosa GTPase regulator
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssc03037
]
100621314 (RPGR)
Cilium and associated proteins [BR:
ssc03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100621314 (RPGR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
100621314
NCBI-ProteinID:
XP_020936451
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Position
X:complement(34238961..34522814)
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AA seq
1229 aa
AA seq
DB search
MPLESPWGPSGLPGPASGLRRCHRPHRVAPTAFRAQAQDPDSALVMGEPEEMVPESGAVF
TFGKTKFAENIASKFWFKNDIPVSLSCGDEHTAIITGNNKLFMFGSNNWGQLGLGSKSTV
DKPTCVKALKPEKVKFAACGRNHTLISTEGGKVYAAGGNNEGQLGLGDTEERNTFHVINF
FTSQHKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNMTSICVPHQVTIGKPISWI
SCGYYHSAFVTTEGELYTFGEPECGKLGLPRKLLVNHRVPQLVPGIPEKVIQVACGGGHT
VALTENAVYVFGLGQFGQLGLGTFIFETSEPKVIDNIKDQKISYISCGENHTALITDLGL
MYTFGDGRHGKLGLGLENFTNQFIPTLCSNFLRFIVQLVACGGCHMLVFATPRLDMADNT
ELDEINDCCSASATSLPISDLNSGNVLHRSLSARVRRREREKSPDSIRMTETLPPIEGTL
APPVSFSTPSVPFCMSTTNLLEKMMPEKKDPTEPMEPDYFQHKMTEEKETDNFSAEDSES
LGKTTDVLNMTHMMNLNSNEKFKLSPIQKQKNQETIEKLTQHTAYTENVGSNECESEEIS
PKMNEGRAYKQLLAQGVYVMQAAMTMDAFADEDVEIPEEQEEEADLEGNGVEEQEREANE
EEEAELLSDDLSDRPEVSEDEGKPGGETELSPEGEGEGIRKEGNSGVEVRRSEEGEEEKG
KGEEETERLGSGEKDLEEEKEREQKEREQGRQKERNKGMKEGEEEEQGRDRREEEEGGEE
EEGEGEEEEEEGEEEQEGEGEEVEEGEEREGEGGEEEGHGEGQEGEGGEEEGDGEGQEGE
EGEEEGDGEGQEGEGGEEEGDGEGQEGEGEEEEGDGEGQEGEGEEEEGDGERQEGEGGEE
EGDGEGQEGEEEEEEGDGEGQEGEGEGEEEEEERDEGQEGEEEGEGDGEGQEGEGGEEEG
DGEGQEGEGGEEEENGEGQEGEGEEEEEEGERDEGQEGEEEEEEGDGEGQEEEGEEEEGG
EEGQEGEGEEEEGDGGGEEEEEQEGEEEGGEEEGGQEEEEEGGEEEEGEGEEEEQGGGEE
GEGEGEGEEEEGEGEEEEGEGGGRAREKERDVGERKEEEKRREEEEEEEEEDKDETGKYQ
ETGNAEGERQGGQGGGRESKKASKIRESAKYDKGKTYSKKRISNREGKGKEHQAQRLQRP
VQAKQLLENGPPGSKKFWNNVLPHYLELK
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgcccctagagtcgccatgggggcccagtgggcttccggggcccgcgtcagggctgagg
cgctgccataggccccaccgagtcgcccccaccgctttccgggcccaggcgcaggatcct
gatagcgccctcgtcatgggggaacctgaggagatggtgcccgaatcaggtgctgtgttt
acgtttggaaaaactaaatttgccgaaaacattgctagcaaattctggtttaaaaatgat
atacctgtatctctttcctgtggagatgaacatactgctattattacaggaaataataaa
cttttcatgtttggcagtaacaactggggccagttaggattaggatcaaaatcaactgtt
gacaagccaacatgtgtcaaagctttaaaaccagaaaaagtgaaatttgctgcctgtgga
agaaaccataccctaatttcaacagaaggaggcaaagtatatgcagctggaggaaataat
gaaggacagctgggacttggtgacactgaagagagaaacacttttcatgtaattaatttt
tttacatcccagcataagattaaacaactctctgctgggtctaacacttcagctgcactg
actgaggacggagagctttttatgtggggtgacaattctgaagggcaaattggtttacaa
aatatgactagtatatgtgttcctcatcaagtgaccattggaaaacctatctcctggatc
tcttgtggatattaccattcagcttttgtaacaacagagggagaactgtacacctttggc
gaaccagagtgtggcaagttaggtcttcccagaaagctgctcgtcaatcacagagtgccc
cagctggtgccagggattcctgagaaggtgatccaagtagcttgtggcggtgggcacacg
gttgccctcacagagaacgctgtgtatgtctttgggctgggacagtttggtcaactgggt
cttggtacttttatttttgaaacttcagaacccaaagtcattgataatattaaggatcag
aaaataagttacatttcctgtggagaaaatcacacagctttgataacagatttaggcctt
atgtatacttttggagatggtcgacatggaaaattaggacttggactggagaattttacc
aatcagttcattcccactttgtgttctaattttttgaggtttatagttcagttggttgcc
tgtggtggatgtcacatgctcgtttttgccactccacgtcttgacatggcagataacact
gagctggatgaaataaatgattgttgctcagcctcagcaacatctctgcccatcagtgat
ctgaactcaggaaatgtgctgcatagatctttatccgcacgtgtgcgtcgaagagagcgg
gagaaatccccagactccattcgaatgacggaaacactacctccaattgaagggactctc
gctccacccgttagcttttctactccttccgttcctttctgtatgtccacaactaatctg
ctagagaaaatgatgcctgaaaagaaggaccccacagagcccatggaaccagattatttt
caacataaaatgaccgaagagaaagagacagataatttttcagcagaggattcagaaagc
cttgggaaaactactgatgtcttaaatatgacacatatgatgaacctgaattccaatgaa
aaatttaaattatcgccaattcaaaaacaaaagaaccaagaaacaattgagaagctgacg
cagcatacagcttatactgaaaatgttggtagtaatgaatgtgaaagtgaagagatatcc
ccaaaaatgaacgaagggagagcatataaacaacttttggcacaaggagtgtacgtgatg
caagcagctatgactatggatgcatttgcagatgaggacgtagagatcccagaggagcag
gaagaagaagctgacttggaaggaaatggagtagaggagcaagagagagaggcaaatgag
gaggaggaagcagagctcctgtcagatgacctttcagacagaccagaggtgagtgaagac
gagggaaagccagggggagagacagagctctcgcctgaaggtgaaggtgagggaatcagg
aaggagggtaattcaggagtagaagtgaggcgaagtgaggagggggaggaggagaaaggc
aaaggagaagaagaaacagagaggctgggtagtggagagaaagacctagaagaggagaag
gaacgggagcaaaaggagagggaacaaggccgtcagaaggaaagaaacaaagggatgaaa
gaaggggaagaggaggagcaaggaagggacagaagagaagaagaagaaggcggggaggaa
gaggagggagaaggtgaagaagaggaggaggagggggaggaagagcaggagggggagggc
gaggaggtagaagagggggaggagcgggaaggagagggaggagaagaggaaggacatggg
gaagggcaggaaggagaggggggagaagaggaaggagatggggagggacaggaaggagag
gagggagaagaggaaggagatggggaggggcaggaaggggaggggggagaggaggaggga
gatggggaggggcaggaaggagagggggaagaagaggaaggagatggggaggggcaggaa
ggagagggggaagaagaggaaggagatggggagaggcaggagggagaggggggagaagag
gaaggagatggggaggggcaggaaggagaggaggaagaggaggaaggagatggggagggg
caggaaggagagggagaaggggaagaagaagaggaggaaagagatgaggggcaggaagga
gaggaggaaggagaaggagatggggaggggcaggaaggggaggggggagaggaggaggga
gatggggaggggcaggaaggggaggggggagaggaggaagaaaatggggaggggcaggaa
ggagagggagaagaggaagaagaagagggggaaagagatgaggggcaggaaggagaggag
gaagaggaggaaggagatggggaggggcaggaagaggagggggaagaagaagagggaggg
gaggaagggcaggaaggagagggggaggaggaggaaggagatgggggaggagaggaagag
gaggaacaagaaggagaggaagaaggaggagaagaagaaggaggacaggaggaagaagaa
gagggaggagaagaggaagagggtgaaggagaggaggaagaacaggggggaggagaagaa
ggagaaggggagggggaaggagaagaggaagaaggagagggggaggaggaggaaggggag
gggggaggcagggcaagggaaaaggagagggatgtaggggagaggaaagaggaagaaaag
aggagagaagaggaggaggaagaggaggaggaggataaggacgagaccgggaagtaccag
gagacaggcaatgcagaaggtgaaaggcagggaggtcagggtggaggaagagaatccaaa
aaagcgagcaaaatcagagaatctgcgaaatatgacaaaggcaaaacatattcaaaaaag
cgtatttctaatagagagggaaagggcaaagagcatcaagcgcagaggctccaaaggcca
gtgcaggccaaacagcttttagaaaatgggccgccaggttccaaaaaattctggaataat
gtattaccacattatttggaattgaagtaa
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