Sus scrofa (pig): 100622502
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Entry
100622502 CDS
T01009
Symbol
CENPB
Name
(RefSeq) major centromere autoantigen B
KO
K11496
centromere protein B
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssc03036
]
100622502 (CENPB)
Chromosome and associated proteins [BR:
ssc03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
Centromere proteins
100622502 (CENPB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CENP-B_dimeris
DDE_1
CENP-B_N
HTH_Tnp_Tc5
HTH_24
MarR_2
HTH_23
HTH_38
HTH_28
HTH_Tnp_IS630
MarR
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
100622502
NCBI-ProteinID:
XP_020933037
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Position
17:31929846..31932539
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AA seq
606 aa
AA seq
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MGPKRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYG
VASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASN
GWLDRFRRRHGVVSCSGVARARSRSAAPRTPAAPASPPAVPSEGSGGGTTGWRAREEQPP
SVAEGYASQDVFSATETSLWYDFLPDQAAGLCGSDGRARRATQRLSVLLCANADGSEKLP
PLVAGKSAKPRAGQAGLPCDYTANSKGGVTAQALAKYLKALDTRMAAESRRVLLLAGRLA
AQSLDTSGLRHVQLAFFPPGTVQPLERGVVQQVKGHYRQAMLLKAMAALEGQDRSGLQLG
LMEALHFVAAAWQAVEPSDIAACFREAGFGGGPNATITTALKSEGEEEEEEEEEEEEEEE
EEGEGEEEEEEEEDGEEEEEEAGEGEELGEEEEVEEEGDVDDSDEEEEEEEEESSSEGLE
AEDWAQGVVEAGGSFGGYGAQEEAQCPTLHFLEGEEDSESDSEEEEEDDDDEEDEDDEDE
EDGDEVPVPSFGEAMAYFAMVKRYLTSFPIDDRVQSHILHLEHDLVHVTRKNHARQAGVR
GLGHQS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgggccccaagcggcggcagctgacgttccgggagaagtcgcggatcatccaggaggtg
gaggagaacccggacctgcgcaagggcgagatcgcgcggcgcttcaacatcccgccgtcc
acgctgagcaccatcctgaagaacaagcgcgccatcctggcgtcggagcgcaagtacggt
gtagcctccacctgccgcaagaccaacaagctgtccccttacgacaagctcgaggggctg
ctcattgcctggttccagcagatccgcgccgctggcctgccggtcaagggcatcatcctc
aaggagaaggcgctgcgtatagccgaggagctgggcatggacgacttcactgcctccaac
ggctggctggaccgcttccgccggcgacacggtgtggtgtcctgcagcggagtggcccgc
gcccggtcgcgaagcgctgctccccggaccccagcggctcccgccagcccgcccgcagtg
ccctcggagggcagcggtgggggtacaacgggctggcgcgctcgggaggagcagccgccg
tcggtggccgagggctacgcctctcaggatgtgttcagcgccactgagaccagcctatgg
tacgacttcctgcccgaccaggccgcagggctatgtggcagcgatggacgggcacgcagg
gccacacaacgcctgagtgtcctgctgtgcgccaacgccgacggcagcgagaagttgccc
ccacttgtggccggcaagtcggctaagccccgtgctggccaagccggcctgccctgcgac
tacactgccaactctaagggtggtgtcaccgcccaggccctggcaaagtacctgaaggcc
ctggacacccgcatggctgcagaatctcgccgagtcctgctgctggctggccgcttggct
gcccagtccctggatacctcgggcctgcggcatgtgcagctagccttcttcccgccgggc
accgtgcagccactggagcgtggagtggtccaacaggtgaagggccactaccgccaggct
atgcttctcaaggccatggccgccctggagggccaggatcgctcaggcctgcagctaggc
ctcatggaggccctgcacttcgtggctgcggcctggcaggcagtggaaccttcagacata
gctgcctgttttcgcgaggctggctttgggggtggccctaatgccaccatcactactgcc
ctcaagagtgagggagaggaagaggaggaggaggaggaagaagaggaggaggaggaagaa
gaggagggtgaaggggaggaggaggaggaggaggaggaagatggcgaggaggaggaggag
gaagcgggggaaggcgaggagctaggggaggaagaggaggtggaagaggagggtgatgtg
gatgacagtgatgaagaggaggaggaggaggaggaggagagctcctcagagggcttggag
gctgaggactgggcccagggagtagtggaggctggtggcagctttgggggttacggtgcc
caggaggaagcccagtgccctaccctgcattttctggagggtgaggaggactctgagtcg
gacagtgaggaagaggaggaagatgacgacgatgaggaagatgaagatgatgaagatgag
gaggatggtgatgaggtgcctgtgcccagctttggggaggccatggcttacttcgctatg
gtcaagaggtacctcacctccttccccattgatgaccgtgtgcaaagccacatcctccac
ttggaacacgacctggtccatgtaaccaggaagaaccatgccaggcaggcaggcgttcgg
ggtcttggacatcaaagctga
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