Sus scrofa (pig): 100626409
Help
Entry
100626409 CDS
T01009
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
ssc
Sus scrofa (pig)
Brite
KEGG Orthology (KO) [BR:
ssc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssc04131
]
100626409 (TRAPPC8)
Membrane trafficking [BR:
ssc04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
100626409 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
100626409
NCBI-ProteinID:
XP_020951870
Ensembl:
ENSSSCG00000003728
LinkDB
All DBs
Position
6:complement(115692509..115786668)
Genome browser
AA seq
1435 aa
AA seq
DB search
MAQCVQSVQELIPDSFVPCVAALCSDEAERLTRLNHLSFAELLKPFSRLTSEVHMRDPNN
QLHVIKNLKIAVSNIITQPPQPGAIRKLLNDVVSSSQPAEGLVANVITAGDYDLNISATT
PWFESYRETFLQSMPASDHEFLNHYLACMLVASSSEAEPVEQFSKLSQEQHRIQHSNDYS
YPKWFIPNTLKYYVLLHDVSAGDEQRAESIYEEMKQKYGTQGCYLLKINSRTSNRASDEQ
IPDPWSQYLQKNSIQNQESYEDGPCTITSNKNSDSNLLSLDGLDNEVKVDGLPNNFRAHP
LQLDPSSDSSNSIDGPDHVKSASLHETKKANTGIIHGACLTLTDHDRIRQFIQEFTFRGL
LPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPEKSINELKNTSGLLYPPEAPE
LQIRKMADLCFLVQHYDLAYSCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRPY
PAHYMDTAIQTYRDICKNMMLAERCVLLSAEILKSQSKYSEAAALLIRLTSEDSDLRSAL
LLEQAAHCFINMKSPMVRKYAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLAE
DHINFTIGRQSYTLRQLDNAVSAFRHILINESKQSAAQQGAFLREYLYVYKNVSQLSPDG
PLPQLPLPYINSSATRVFFGHDRRPADGEKQAATHVSLDQEYDSESSQQWRELEEQVVAV
VNRGVIPSNFHPTQYCLNSYSDNSRFPLAVVEEPITVEVAFRNPLKVPLLLTDLSLLWKF
QPKGVSGEDNEEVKELVKGESEMIGTEVITEFLINSEESKVARLKLFPHHIGELHILGVV
YNLGTIQGSVTVDGIGALPGCHTGKHSLSMSVRGRQDLEIQGPRLNNTKEEKTSIKYGPD
RRLDPIITEEMPLLEVFFIHFPTGLLCGEIRKAYVEFVNVSKCPLTGLRVVSKRPEFFTF
GGNTAALTPLSPSASENCSAYKTVVTDPTSVCTALTSSASSVDFGIGTGSQPEVIPVPLP
DTVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESVKKQPKIRHRILRHTAVICTSRSLN
VRATVCRSNSLEDEEGRGGNMLVFVDVENTNTSEAGVKEFHIVQVSSSSKHWKLQKSVNL
SENKDAKLASREKGKFCFKAIRCKEEEVATQSPEKYTFADIIFGNEQIVSSASPCADFFY
RSLSSELKKPQAQSSLHTEKQSIEDAVRLIQKCNEVDLNIVVLWKAYVVEDNKQLILEGQ
HHVVLHTIGKEAFSYPQKQEPPEMELLKFFRPENTTVSSRPSVEQLSNLIKMSLHYPESF
NHPFHQKSLCLVPVTLLLSNCSKADVDVIVDLRHKTTSPEALEIHGSFTWLGQTQYKLQL
KSQEIHSLQLKACFVHTGVYNLGTPRVFAKLSDQVTVFETSQQNSMPALIIINNV
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgtgtacagtcggtgcaggagctcatcccggactccttcgtaccctgtgtc
gccgcgctatgcagcgacgaagccgagcggctcactcgtctcaatcaccttagcttcgcg
gagttgcttaagcccttctctcgcctcacttccgaggttcatatgagagatcccaataat
cagcttcatgtaattaaaaatttgaagatagcagtaagcaacattattacccaaccacct
caacctggagccattcggaagcttttgaatgatgttgtttctagcagtcagcctgcagaa
ggattagtagctaatgtgattacagcaggagattatgacctcaacatcagtgctactact
ccatggtttgaatcttacagagagacctttcttcagtcgatgccagcatcagatcatgaa
tttctgaaccactatttagcatgcatgttggtggcatcgtctagtgaagctgaacctgtg
gaacagttttcaaagttgtcacaagaacagcatcgaattcaacacagcaatgactattcc
taccccaagtggtttataccaaatacacttaaatattatgtacttttacatgatgtaagt
gcaggagatgaacagagagctgaatcaatttatgaagaaatgaaacagaaatatggaact
cagggttgctatttacttaaaattaattctcgaacatctaatcgagcctcagatgagcag
ataccagatccttggagtcagtatctccagaaaaatagtattcaaaaccaggaatcatat
gaagatggcccttgtactataacttcaaataagaattctgatagtaacttgctttcattg
gatggattagataacgaagtcaaagtagatggcttaccaaataactttagagctcaccca
ctccaattggacccatccagtgactcttctaacagcattgatggcccagatcatgtaaaa
tctgcttctttacatgaaacaaagaaagcaaatactggcattattcatggtgcatgttta
acccttactgatcatgatagaattcgacagtttatacaagagttcacgtttcggggcctt
ttgccacatatagagaaaacaattcggcaattaaatgatcagctaatatcaagaaaaggt
ttgagtcgatctctattttctgcaactaaaaaatggtttagtggcagtaaagttccagaa
aagagcattaatgagctaaaaaatacatctggattactgtatccaccagaagcaccagaa
cttcaaatcagaaaaatggctgacttatgttttttggtgcagcattatgatttggcttac
agttgctatcatactgcaaagaaggattttcttaatgatcaagcaatgctttatgcagct
ggtgccttggaaatggcagcagtgtcagcttttcttcagccaggagctcctaggccatac
cctgcacattatatggatacagcaatccagacatacagggatatctgcaagaatatgatg
ttggctgaaagatgtgtattacttagtgctgaaatcttaaaaagccaaagcaaatattca
gaggctgcagctctcctaatacggttaactagtgaggactctgatcttcgaagtgcactt
cttttggaacaggcagcacattgctttataaacatgaagagtcccatggtcagaaaatac
gcttttcacatgatattggcaggccatcgatttagtaaggcaggacagaaaaaacatgct
ttacgctgctattgtcaggccatgcaagtttacaaaggaaaaggctggtctcttgcagag
gatcacattaacttcaccattgggcgtcagtcctatactcttaggcaactggacaatgct
gtgtctgcttttaggcatattttaatcaatgaaagtaaacaatctgctgctcaacaaggg
gccttcctcagagaatatctttatgtttacaagaatgtaagtcagttatcaccagatggt
cctttaccacagcttcctttaccatatattaacagttcagccacacgggttttctttggc
catgacagacgaccagcagatggtgaaaagcaagcagctactcatgtaagtcttgatcaa
gaatatgactctgaatcctcacaacagtggcgagaacttgaggaacaagttgtggctgtg
gttaacagaggagtaattccatccaatttccaccccacacaatactgtttgaatagttat
tcagataactcaagatttccgcttgcagttgtagaagaaccaataacagtggaagtggct
tttagaaaccctttgaaggttccacttttgttgactgatttgtcattgctctggaagttt
cagcccaaaggtgtcagtggagaggataatgaagaagttaaagaactagtaaaaggtgaa
tctgaaatgattggaactgaagttattacagaattcttaattaatagtgaagaatctaaa
gtggcgagactaaagctctttccccatcacataggggagctgcatattctgggagttgtt
tataatcttggcacaattcagggctccgtgacagtggatggcattggtgctcttcctgga
tgtcacacaggaaaacattccttgagtatgtcagtccgagggagacaggatttagaaatt
caaggtcctcgacttaacaacacaaaagaagagaaaacatctattaaatatggtcctgat
cgacgtttagatcccataatcactgaggaaatgccactattggaggtgttctttatacat
tttcctacagggctcctctgtggggaaatccgaaaagcatatgtagaatttgtcaacgtc
agcaaatgtcctcttactggattgagggttgtttctaaacgtccagagttctttactttc
ggtggtaacacggctgctctaacaccgctaagtccctcagcctctgagaactgtagtgct
tacaagactgttgtgacagatcctacctctgtgtgtacagcactcacatcatcagcttct
tctgtagactttggcattggcacaggaagtcagccagaggtgattcctgttccccttcct
gacactgttcttctgcctggagcttcagttcagctgccgatgtggttgcgtgggccagat
gaagaaggtgtccatgaaattaactttttgttttactatgaaagtgttaaaaagcagccc
aaaatacgtcacagaatattgagacacacagcagtcatttgtaccagtcgatctctgaat
gtacgagccaccgtctgcagaagtaattctcttgaagatgaggagggcagaggaggcaat
atgctagtctttgtggatgtggaaaataccaatactagtgaagcaggtgttaaggaattc
cacatagtacaagtatcaagtagtagcaaacactggaagttacagaaatctgtaaatctc
tctgaaaacaaagatgccaaacttgccagtagggagaagggaaaattttgtttcaaggca
atacgatgtaaggaggaagaagttgccacacagtccccagaaaagtacacctttgcagat
atcatctttggaaatgaacagatagtaagttcggcaagcccatgtgcagacttcttttat
cgaagtttatcctctgaattgaagaaaccacaagctcagtcttctctgcatacagaaaaa
cagtcaatagaggatgctgtgagattaattcagaagtgcaatgaagtagatttgaatatt
gttgtattgtggaaggcatacgtagtggaggacaataagcagcttattttggaaggtcag
catcatgttgttcttcacactataggaaaagaagctttttcctatcctcagaaacaggag
ccaccagaaatggaactattaaaatttttcaggccagaaaacactacagtttcttcaaga
ccatcagtagagcagctttctaatctcattaaaatgagtcttcactatccagaatccttt
aatcatccctttcatcaaaaaagcctttgtttagtaccagtgacccttttactttccaat
tgttcaaaggctgacgttgatgtaatagttgatcttcggcataaaacaacaagcccagaa
gcattggaaatccatggatcatttacgtggcttggacaaacacaatataaacttcagctt
aaaagccaggagattcacagtttgcagctgaaagcatgttttgtccataccggtgtttat
aaccttggaactcccagggtatttgccaagttatcggaccaagtcacagtgtttgaaaca
agtcagcagaactccatgcctgccctaatcatcatcaataatgtgtga
DBGET
integrated database retrieval system
