Sporothrix schenckii: SPSK_01566
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Entry
SPSK_01566 CDS
T05555
Name
(RefSeq) transcription initiation factor TFIIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ssck
Sporothrix schenckii
Pathway
ssck03022
Basal transcription factors
ssck03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPSK_01566
09124 Replication and repair
03420 Nucleotide excision repair
SPSK_01566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssck03021
]
SPSK_01566
03400 DNA repair and recombination proteins [BR:
ssck03400
]
SPSK_01566
Transcription machinery [BR:
ssck03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SPSK_01566
DNA repair and recombination proteins [BR:
ssck03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SPSK_01566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Reprolysin_3
DUF2283
Tfb4
Motif
Other DBs
NCBI-GeneID:
27663752
NCBI-ProteinID:
XP_016589683
UniProt:
A0A0F2MBK0
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MADSDGEYVENQSDDGGGGDDHYMTLERGEDRQPAGQRHGRHLQVPGAHAPRRPGGPTSN
GRPHQSQGPGQGQGLGQGQRQTRRKQTRQKQQASWETVKRSWDTVVEAADGQIVGIELLE
AAEKRRRVLRDTTPLQRGIIRHMVLVLDMSIAMAARDYLPSCHRVALNCAATFVRAYFEQ
NPISQLAIIAMRDGVALRVSDMGGNPAEHLEKLHEWDNVEPQGHPSLQNALEMCRGALFH
TPSHGTREVLVIFGALLSSDPGDIHDTIGALLTDRIRVSIVGLAAQVAICSEICTRTNGG
DDRSYNVALHDVHFRELFLAATTPPATQAAADQSNPASLLMMGFPSRAIADSHVAGGGGL
SVCACHNKPVREGYACTRCRTKVCRLPAECPACGLTLILSTHLARSYHHLFPLRNWSVVS
WVAAAAAVRQRGATACHACLVPFPDLPPPERLRELQAAADADADADAGDKERSGDAGADT
AGGRPTQKQQGTAGAAQIDASTDPAAAALNNQLKGVSESSRYACEVCGHHFCIDCDVFAH
EVVHNCPGCQSDTRPPAEKEADARARAAEVAAFAAAAAATAAAAAASANSAAVAASEAGA
MANSASSSSSAAAIRPKTKILLKARGSAAAAPAPAEGMVID
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcggacggcgaatacgtggaaaaccagtccgacgatggcggcggcggtgac
gaccactatatgacactggagcgaggcgaggaccgtcagccagccggccagcggcatgga
cggcacctgcaagtaccaggcgcgcacgctccaaggcgaccgggcggtcctactagcaac
ggccggccgcatcaaagtcaaggcccgggccaaggacaagggctaggacaaggacagcgg
cagacgcggcgaaaacagacccgccagaagcagcaggcgtcatgggagacggtcaaacgg
tcctgggacacggtcgtcgaggctgccgacggccagatcgtgggcatcgagctgctcgag
gcggccgagaagcgccgccgcgtgctgcgcgacaccacgccgttgcagcgcggcatcatc
cgccacatggttctcgtgctcgacatgagcatcgccatggcggcccgcgactacctgccc
tcctgccaccgcgtcgccctcaactgcgcggccacgtttgtgcgcgcctactttgagcag
aaccccatctcgcagctcgccatcatcgccatgcgggacggcgtggcgttgcgcgtcagc
gacatgggcggcaacccggcggagcacctcgaaaaactgcacgagtgggacaatgtcgag
ccccagggccaccccagcctgcagaacgcgctcgaaatgtgccgcggcgctctgttccac
acgccctcgcacggcacacgcgaggtgctcgtcatctttggcgcgctgctctcgtcggac
ccgggcgacatccacgacaccattggcgctctcctgaccgaccgcattcgcgtgtccatt
gtcggcctggccgcccaggtggccatctgctcggagatctgcacgcgcaccaatggcggc
gacgaccgctcctacaatgtcgcgctgcacgacgtgcactttcgcgaactctttctcgcc
gcaactacaccaccagccacccaggcggccgcggaccagagcaacccggccagcctgctc
atgatgggcttcccgagccgcgccatcgccgactcccacgttgccggcggcggcggtctc
agcgtgtgcgcctgccataacaaacccgtgcgcgagggctatgcgtgcacgcgctgccgc
accaaagtctgccggctgcccgccgaatgccctgcctgcggcctgacgctgatcctctcc
acgcatctggcccgctcctaccaccatctcttcccgctgcgcaactggtccgtcgtgtcc
tgggtggctgccgcggccgccgtgcgccagcgcggcgccacggcctgccacgcctgtctc
gtgccctttcccgacctgccgccgcccgaacggctgcgcgaactgcaagcggccgccgat
gccgatgccgatgccgatgccggcgacaaggagaggtccggggatgcgggcgcagacacc
gccggtggccgtccaacacagaagcaacaggggacggccggcgccgcgcagattgatgcc
tccacggacccggccgccgcggccctcaacaaccagctcaagggcgtcagcgagagcagc
cgctacgcgtgtgaggtgtgtggccaccacttttgcatcgactgcgacgtgtttgcccac
gaggtcgtgcacaactgccccggctgccagagcgacacgcgcccgcctgccgagaaggag
gccgatgcacgcgcccgtgcggccgaggtggcggcgtttgcggccgccgccgccgccact
gccgccgctgctgccgcctcggccaactcggccgcagttgctgcgtccgaggccggcgcc
atggccaactcggcgtcgtcatcgtcctcggcggctgccatacggccaaaaacgaagatt
ttactcaaggcgcgagggtcggcagcggcagcgcccgccccggcagagggcatggtgatt
gactag
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