KEGG   Sporothrix schenckii: SPSK_05890
Entry
SPSK_05890        CDS       T05555                                 
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
ssck  Sporothrix schenckii
Pathway
ssck03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ssck00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SPSK_05890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssck03400]
    SPSK_05890
Enzymes [BR:ssck01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SPSK_05890
DNA repair and recombination proteins [BR:ssck03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     SPSK_05890
SSDB
Motif
Pfam: DNA_ligase_A_N DNA_ligase_A_M BRCT RNA_ligase BRCT_2 DNA_ligase_A_C DNA_ligase_IV
Other DBs
NCBI-GeneID: 27667876
NCBI-ProteinID: XP_016592575
UniProt: A0A0F2MLF4
LinkDB
Position
Unknown
AA seq 1023 aa
MSEPHIKREDSPGAEARREDLLQYGHSLQPDDDRYPNRPHNHSATLLFSELFRSFFNPLS
EVKAQPAVLGPARLKAGFGPGSSRLSPHEQRRAIIQRFISRWRTEVGNDFYPALRLILPD
KDRDRSVYGLKENTIGKLLVKLMKIDKNSEDGFNLIHWKLPGQSVISRMAGDFAGRCYEV
LAKRPLLTEVGDLRIGQVNALLDKLADASGESEQLPIFETFYEHMNPEELTWLIRIILKQ
MKIGASERTILNLWHPDGEALFNVSSSLRRVCWELYDPQVRLEQDSSRVSLMQCFQPQLA
QFQISTSFQKLVEKLGPTQDDSEFWIEEKLDGERMQMHMAKDNSMPGGWRFCFWSRKAKD
YTDLYGDSLNNNKSALTQHLKGAFADGVHNLILDGEMITWDPLIDKIVAFGTLKTAAIGA
QSNPHDITAPRPLFRVFDILYLNDQPLARYTLYDRHRALERAVVGVPRRLEVHPYEKATS
PDVIEPMLRQIVANSSEGLVLKNPCSMYRLNSRNDDWIKVKPEYMTEFGESLDCLVVGGY
FGSGHRGGTLSSFLCGLRVGQNHIDAGASSEKCLSFFKVGGGFKAEDYAEIRHLTENKWV
DWDSSNPPSEFIELAGGERAQLEKPDVWIRPKDSIVISVKAASISPSDSFAVRETLRFPR
FRRLRLDRSWNTALDTEQFQALRDRINEEAKDRKEMQIEDRRQRRPTKKAKLGLVIVGQG
RGDKKDSEDSGALFEPAQFPDEQPPGNVFKGFTFCVLSEAVHPTKKSRGEIEALIKRHGG
RISQRPDATANTVIIADRKVIKVASLIKAAQVDIIRPVWLIDCLSQKGGDFLLPFEHRHL
LHATEETRREAALATDEFGDSFARDVTVGGLQEILGGMQPARRGDYDDSFDVRVFLDQLG
ERGHDLGSPRSLMFRRCHVHFAVVGTTSSTFLIHLKARIRFGGGLVEDNIDKDTTTHVVI
VKTAGTYGAEDTARNYVMDIRQRLSSRTKQPRIVETSWLDDSWKAGTLLDEEQYVFRCSR
MPL
NT seq 3072 nt   +upstreamnt  +downstreamnt
atgagcgagccacacatcaaaagggaggactcgcccggtgcggaagcacggagggaggac
ttgcttcaatacggacacagtctacagccagacgacgataggtacccgaaccggccgcat
aaccactcggccacactgctcttttcggagcttttccgcagctttttcaaccctttgagt
gaggtcaaagcgcagcccgccgttcttgggccggcgcgattgaaggcaggctttgggcct
ggctcatcacgactttcgccccatgagcagcgacgggccatcatccagcgatttatatca
cgatggcggacagaggtggggaatgacttttatcctgcgctgcgactcatcctaccggac
aaggatcgtgatcgcagtgtgtacgggctaaaagaaaacaccattggcaagctcctggtg
aagcttatgaaaatcgacaaaaattctgaagacggtttcaacctaatccattggaagctc
cccgggcagagtgtaatcagccgcatggccggtgactttgcggggcgctgctacgaagtt
cttgccaagcgcccgttactgacagaagtgggcgacctacgcatcggccaggtgaatgcg
cttttagacaaactggcagatgctagtggcgaatcagagcaattgcctatattcgaaaca
ttctacgagcacatgaaccccgaggaattgacttggctcattcgcatcattctcaagcag
atgaagatcggtgcgagcgagaggacaatacttaacctgtggcaccctgacggcgaggct
ctgtttaatgtgtcttccagcttacgccgggtttgctgggagctctacgacccgcaagtt
cgattagagcaggacagctccagggtctcactcatgcaatgctttcaaccgcagctagcc
caatttcagatctccacttctttccaaaaattggtggagaagctaggtcctactcaagac
gatagcgaattctggattgaggagaagctcgacggagagcgtatgcaaatgcacatggcc
aaagataacagcatgcctggtggttggaggttctgcttttggtcacgaaaagcaaaagac
tataccgatctttatggtgatagtctaaacaacaacaaatccgcccttacacagcacctt
aaaggcgcttttgcagatggcgtgcacaacttgattttggacggcgagatgatcacatgg
gatcctctaattgacaagattgtcgctttcggtacattaaaaacagcagcaatcggggcc
cagagcaacccgcatgatatcacagcaccgcggccactttttcgagtatttgatattctt
tacctaaacgaccaacctctggcgcgatacacactttacgatcggcaccgggcattagag
agagctgtcgtaggtgtgcctcgacggcttgaagtgcacccttacgagaaagccacgtcg
ccggatgtgattgagcctatgctgcggcagattgtggccaactcctctgaaggtttggtt
ttgaaaaatccctgctcaatgtatcggctgaatagccgcaacgatgactggatcaaagtc
aaaccagaatatatgaccgagtttggcgagtcactggattgcctcgttgtcggcggctat
ttcgggtcgggacatcggggtggtactctctcgagttttttatgcggtcttcgtgttggt
caaaaccatatcgatgccggcgccagctcggagaaatgtcttagctttttcaaggtcggc
ggtgggttcaaggcagaagactatgcagagatacgtcacttgacagaaaataaatgggtt
gattgggatagctccaatccaccgtccgaattcattgagcttgccggcggagagcgggca
cagctagagaaaccggacgtttggatcaggcccaaggactccatcgttatctcggttaag
gcagcgagcatttcgccttcggattcgtttgcggtgagagagacactacggtttccacgt
ttccgccgattacgccttgaccggtcgtggaataccgctcttgacacggagcaattccaa
gctctccgggaccgcatcaatgaagaagccaaagaccgaaaggagatgcagatagaagac
agacgccagcggcgtcccacaaaaaaggccaagctaggcttggttattgttggccaaggc
cgtggagataaaaaggacagtgaagacagcggcgccttatttgaaccggcacaatttccc
gacgagcagcctccaggcaacgtcttcaaaggcttcacattttgtgttttgtccgaagcc
gtacatcctaccaaaaagagccgcggtgaaattgaagctctcataaaacggcatggtgga
cgcatatctcaacggccagatgccaccgctaatacggtcatcatagccgacaggaaggtc
attaaagttgcgtctctgatcaaagctgcacaagttgatatcatccgaccagtgtggctt
atagactgcctttcgcaaaagggtggggatttccttcttccttttgaacatcgtcatctc
ttgcatgctacggaagaaacaagaagagaagctgctttggctacagacgaatttggcgac
agtttcgcacgcgatgtgactgttggcggacttcaagaaattttaggcgggatgcagcca
gcgagaaggggagactatgatgactcttttgatgtacgtgtgtttctcgatcagttgggt
gaacgcggccacgacttagggtccccaaggagcctcatgtttcggcggtgccatgtacac
tttgcagttgtgggcactacatcgtcgacatttcttatacatctcaaggcccgtatcaga
tttgggggtggcctcgtggaagacaacatcgacaaggacactacgacacatgttgtcatc
gtcaaaacggcaggcacatatggagctgaagatacggcccgaaactatgtgatggatatc
cgccagcggctgagtagccgaacgaaacagccacggatcgttgagacgtcatggcttgac
gactcgtggaaagcaggcactcttctcgacgaagagcagtacgtgttcaggtgtagcaga
atgccattgtaa

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