Sporothrix schenckii: SPSK_05890
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Entry
SPSK_05890 CDS
T05555
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ssck
Sporothrix schenckii
Pathway
ssck03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SPSK_05890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssck03400
]
SPSK_05890
Enzymes [BR:
ssck01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
SPSK_05890
DNA repair and recombination proteins [BR:
ssck03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
SPSK_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
BRCT
RNA_ligase
BRCT_2
DNA_ligase_A_C
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
27667876
NCBI-ProteinID:
XP_016592575
UniProt:
A0A0F2MLF4
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MSEPHIKREDSPGAEARREDLLQYGHSLQPDDDRYPNRPHNHSATLLFSELFRSFFNPLS
EVKAQPAVLGPARLKAGFGPGSSRLSPHEQRRAIIQRFISRWRTEVGNDFYPALRLILPD
KDRDRSVYGLKENTIGKLLVKLMKIDKNSEDGFNLIHWKLPGQSVISRMAGDFAGRCYEV
LAKRPLLTEVGDLRIGQVNALLDKLADASGESEQLPIFETFYEHMNPEELTWLIRIILKQ
MKIGASERTILNLWHPDGEALFNVSSSLRRVCWELYDPQVRLEQDSSRVSLMQCFQPQLA
QFQISTSFQKLVEKLGPTQDDSEFWIEEKLDGERMQMHMAKDNSMPGGWRFCFWSRKAKD
YTDLYGDSLNNNKSALTQHLKGAFADGVHNLILDGEMITWDPLIDKIVAFGTLKTAAIGA
QSNPHDITAPRPLFRVFDILYLNDQPLARYTLYDRHRALERAVVGVPRRLEVHPYEKATS
PDVIEPMLRQIVANSSEGLVLKNPCSMYRLNSRNDDWIKVKPEYMTEFGESLDCLVVGGY
FGSGHRGGTLSSFLCGLRVGQNHIDAGASSEKCLSFFKVGGGFKAEDYAEIRHLTENKWV
DWDSSNPPSEFIELAGGERAQLEKPDVWIRPKDSIVISVKAASISPSDSFAVRETLRFPR
FRRLRLDRSWNTALDTEQFQALRDRINEEAKDRKEMQIEDRRQRRPTKKAKLGLVIVGQG
RGDKKDSEDSGALFEPAQFPDEQPPGNVFKGFTFCVLSEAVHPTKKSRGEIEALIKRHGG
RISQRPDATANTVIIADRKVIKVASLIKAAQVDIIRPVWLIDCLSQKGGDFLLPFEHRHL
LHATEETRREAALATDEFGDSFARDVTVGGLQEILGGMQPARRGDYDDSFDVRVFLDQLG
ERGHDLGSPRSLMFRRCHVHFAVVGTTSSTFLIHLKARIRFGGGLVEDNIDKDTTTHVVI
VKTAGTYGAEDTARNYVMDIRQRLSSRTKQPRIVETSWLDDSWKAGTLLDEEQYVFRCSR
MPL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagccacacatcaaaagggaggactcgcccggtgcggaagcacggagggaggac
ttgcttcaatacggacacagtctacagccagacgacgataggtacccgaaccggccgcat
aaccactcggccacactgctcttttcggagcttttccgcagctttttcaaccctttgagt
gaggtcaaagcgcagcccgccgttcttgggccggcgcgattgaaggcaggctttgggcct
ggctcatcacgactttcgccccatgagcagcgacgggccatcatccagcgatttatatca
cgatggcggacagaggtggggaatgacttttatcctgcgctgcgactcatcctaccggac
aaggatcgtgatcgcagtgtgtacgggctaaaagaaaacaccattggcaagctcctggtg
aagcttatgaaaatcgacaaaaattctgaagacggtttcaacctaatccattggaagctc
cccgggcagagtgtaatcagccgcatggccggtgactttgcggggcgctgctacgaagtt
cttgccaagcgcccgttactgacagaagtgggcgacctacgcatcggccaggtgaatgcg
cttttagacaaactggcagatgctagtggcgaatcagagcaattgcctatattcgaaaca
ttctacgagcacatgaaccccgaggaattgacttggctcattcgcatcattctcaagcag
atgaagatcggtgcgagcgagaggacaatacttaacctgtggcaccctgacggcgaggct
ctgtttaatgtgtcttccagcttacgccgggtttgctgggagctctacgacccgcaagtt
cgattagagcaggacagctccagggtctcactcatgcaatgctttcaaccgcagctagcc
caatttcagatctccacttctttccaaaaattggtggagaagctaggtcctactcaagac
gatagcgaattctggattgaggagaagctcgacggagagcgtatgcaaatgcacatggcc
aaagataacagcatgcctggtggttggaggttctgcttttggtcacgaaaagcaaaagac
tataccgatctttatggtgatagtctaaacaacaacaaatccgcccttacacagcacctt
aaaggcgcttttgcagatggcgtgcacaacttgattttggacggcgagatgatcacatgg
gatcctctaattgacaagattgtcgctttcggtacattaaaaacagcagcaatcggggcc
cagagcaacccgcatgatatcacagcaccgcggccactttttcgagtatttgatattctt
tacctaaacgaccaacctctggcgcgatacacactttacgatcggcaccgggcattagag
agagctgtcgtaggtgtgcctcgacggcttgaagtgcacccttacgagaaagccacgtcg
ccggatgtgattgagcctatgctgcggcagattgtggccaactcctctgaaggtttggtt
ttgaaaaatccctgctcaatgtatcggctgaatagccgcaacgatgactggatcaaagtc
aaaccagaatatatgaccgagtttggcgagtcactggattgcctcgttgtcggcggctat
ttcgggtcgggacatcggggtggtactctctcgagttttttatgcggtcttcgtgttggt
caaaaccatatcgatgccggcgccagctcggagaaatgtcttagctttttcaaggtcggc
ggtgggttcaaggcagaagactatgcagagatacgtcacttgacagaaaataaatgggtt
gattgggatagctccaatccaccgtccgaattcattgagcttgccggcggagagcgggca
cagctagagaaaccggacgtttggatcaggcccaaggactccatcgttatctcggttaag
gcagcgagcatttcgccttcggattcgtttgcggtgagagagacactacggtttccacgt
ttccgccgattacgccttgaccggtcgtggaataccgctcttgacacggagcaattccaa
gctctccgggaccgcatcaatgaagaagccaaagaccgaaaggagatgcagatagaagac
agacgccagcggcgtcccacaaaaaaggccaagctaggcttggttattgttggccaaggc
cgtggagataaaaaggacagtgaagacagcggcgccttatttgaaccggcacaatttccc
gacgagcagcctccaggcaacgtcttcaaaggcttcacattttgtgttttgtccgaagcc
gtacatcctaccaaaaagagccgcggtgaaattgaagctctcataaaacggcatggtgga
cgcatatctcaacggccagatgccaccgctaatacggtcatcatagccgacaggaaggtc
attaaagttgcgtctctgatcaaagctgcacaagttgatatcatccgaccagtgtggctt
atagactgcctttcgcaaaagggtggggatttccttcttccttttgaacatcgtcatctc
ttgcatgctacggaagaaacaagaagagaagctgctttggctacagacgaatttggcgac
agtttcgcacgcgatgtgactgttggcggacttcaagaaattttaggcgggatgcagcca
gcgagaaggggagactatgatgactcttttgatgtacgtgtgtttctcgatcagttgggt
gaacgcggccacgacttagggtccccaaggagcctcatgtttcggcggtgccatgtacac
tttgcagttgtgggcactacatcgtcgacatttcttatacatctcaaggcccgtatcaga
tttgggggtggcctcgtggaagacaacatcgacaaggacactacgacacatgttgtcatc
gtcaaaacggcaggcacatatggagctgaagatacggcccgaaactatgtgatggatatc
cgccagcggctgagtagccgaacgaaacagccacggatcgttgagacgtcatggcttgac
gactcgtggaaagcaggcactcttctcgacgaagagcagtacgtgttcaggtgtagcaga
atgccattgtaa
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integrated database retrieval system