Sporothrix schenckii: SPSK_07025
Help
Entry
SPSK_07025 CDS
T05555
Name
(RefSeq) tRNA wybutosine-synthesizing protein 1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
ssck
Sporothrix schenckii
Brite
KEGG Orthology (KO) [BR:
ssck00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssck03016
]
SPSK_07025
Enzymes [BR:
ssck01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
SPSK_07025
Transfer RNA biogenesis [BR:
ssck03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
SPSK_07025
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Flavodoxin_1
Motif
Other DBs
NCBI-GeneID:
27668972
NCBI-ProteinID:
XP_016591450
UniProt:
A0A0F2MI88
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MASTSRASSPFIRDLLIVVVDAWHAYRIPILLATFAALVSLRIYLHVAGSGDDREGLLIF
PKIYDNTTVVDEKKKLQQQEQPPSVQEDVKIAVLQQTKTISYPGSTSDKKTITPTATKKS
STAKTANATTPSSTTTKAAAGPRRIKGELPKGNGAAAVARVPTRIQTIVFYSSITGATAK
IVRDYATELSTTLGELKPEGGSDSKGNVFAPVEVLDIAEVDLDEYFISPPKDASDAASGR
TTDYLYLFLLPSYNIDSINDTFLEHLKETHHDFRIDTAPLAPLLGYSVFGFGDREGWPTE
DEGFCFQAKEVDKWMAKLTGRKRAFPMGVGNTKTDAMLRLAEWSEGVVDVLGLVARTGSL
GTGVRGSGDAVETDDEDEDEASDDGSDAYDDGSNDDDGAADANGAAYDNDDVLFGGNAAR
NANVKRLKKAGVIDDVEDLGRLLRSSKEDDAVDDTAVDDVAEVPGTNVNKAPIAIDFTTY
GANDSSTTNGGPRRTGRKAAAPAPKEMVAKDTPTYKSLTKQGYAIVGSHSGVKICRWTKS
ALRGRGSCYKYSFYGINSHQCMETTPSLSCSNKCVFCWRHGTNPVGTTWRWVVDPPDLIF
DGVKANHYQKIKMMRGVPGVRAERFAEAMRIRHCALSLVGEPIFYPHINEFLGMLHSENI
SSFLVCNAQHPDQLAALHHVTQLYVSIDASNRETLRKIDRPLHRDFWERFQRCLAILREV
RFRQRTVFRLTLVKGFNIDDEVQGYADLVEQALPCFVEVKGVTFCGTSTSAGVGLTMANV
PFYDEVCEFVTALEKELQSRGLAYGLAAEHAHSCCVLLASERFKRDGKWHTVIDYDKFFA
LLREKGPQGDFAPEDYMGPPTAEWATWGRGGFDPRDQRVDRKGRPIER
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgacttcccgggcgagcagcccgttcatacgagatttgctcattgtggtcgtc
gacgcatggcacgcctaccgcattcccattcttctggccacgtttgctgccctcgtctcg
ctgcgcatctacctgcacgtggccggctcaggtgacgatagggaaggtctgctcatcttc
cccaagatctacgacaacacgaccgtcgtcgacgagaagaagaagctgcagcaacaagaa
cagccgccgtcggtccaagaggacgtcaaaatcgccgtgctccagcagaccaagaccatc
tcctaccccggctccacgagcgacaagaagacgatcaccccgaccgcgaccaagaaatcc
tcaactgccaagacggcgaatgcgaccactccttcctccacgaccaccaaggctgcggct
ggcccgcgccgtatcaagggcgagcttccaaagggcaacggtgccgctgctgtcgctcgc
gtgcccacgcgcatccagacaattgtcttttactcgtccataacgggtgccacggccaag
attgtgcgtgactatgccaccgagctgagcactacgctgggcgaactgaagccggaaggt
ggcagcgacagcaagggcaacgtctttgcgcccgttgaggttctggacattgccgaggta
gacctggacgaatactttatctcgccgcccaaggatgcctccgacgccgcctctggccga
accaccgactacctgtacctcttcctcctccccagctacaacattgactccatcaacgac
accttccttgagcacctcaaggagacacaccatgacttccgcatcgacaccgcaccgctc
gcgcccctcctgggctactccgtatttggctttggcgaccgcgaaggctggcccaccgag
gacgagggcttttgcttccaggccaaggaggtcgacaagtggatggccaagctgacaggt
cgcaagcgtgcctttcccatgggcgtcggaaacacgaagacggacgccatgctgcggctg
gccgagtggtccgagggcgttgtcgacgtcctgggccttgtcgcccgcacgggcagtctc
ggcactggtgtgcggggatcgggcgatgccgtcgagacggacgatgaggacgaggatgag
gcgagcgacgacggtagcgatgcctacgacgacggcagcaacgacgatgacggcgctgct
gatgccaacggcgcggcctacgacaacgacgacgtcctgtttggcggcaatgcggcgcgc
aatgccaacgtcaaacggctgaagaaggccggcgtcatcgacgacgtcgaggacctgggc
cgcctgctgcggagctccaaagaggacgacgctgttgatgacactgcggttgacgacgtc
gccgaggtgcctggcaccaacgtcaacaaggcacccattgccatcgactttacgacatac
ggcgcgaatgatagcagcaccaccaacggtggtccgcgtcgcaccggccggaaagcggct
gcccctgcaccaaaggaaatggtcgccaaggatacaccgacatacaagtctcttaccaaa
cagggctacgctattgtcggctcgcactcgggcgtcaagatctgccgctggaccaagtcc
gccctccgtggccgcggctcctgctacaagtactccttctacggtatcaactctcaccag
tgcatggagaccaccccctcgctctcgtgctccaacaaatgcgtcttctgctggcgccac
ggcaccaaccccgtcggcaccacctggcgctgggtcgtcgacccgcccgacctcatcttt
gacggcgtcaaggccaaccactaccaaaagatcaagatgatgcgcggcgtgcctggcgtg
cgcgccgagcggtttgccgaggccatgcgcatccgccactgtgcactgtcgctcgttggc
gagcccatcttctacccgcacattaacgagttcctgggcatgctgcacagcgaaaacatc
tcgtcgttcctcgtctgcaacgcccaacatccggaccagctcgccgccctccaccacgtc
acccagctctacgtgtccattgacgcctccaaccgcgagacgctgcgcaagatcgaccgt
ccgctgcaccgcgacttttgggagcgcttccagcgctgcctcgccatcctgcgcgaggtc
cgcttccgccaacggaccgtgttccgcctgaccctcgtcaaggggttcaacattgacgac
gaggtgcagggctacgccgacctggtcgagcaggcgctgccctgttttgtcgaggtcaag
ggcgtcaccttctgcggcacctcgacgtccgccggcgtcggcctcaccatggccaacgtg
cccttttacgacgaggtgtgcgagtttgtgacggccctcgagaaggagctgcagagccgc
ggcctcgcctacggcctggccgccgagcacgcccacagctgctgcgtgctgctggcgagc
gagcgtttcaagcgcgacggcaagtggcacaccgtcattgactacgacaagttctttgcg
ctgctgcgcgaaaagggcccccagggcgactttgcacccgaggactacatgggcccgccg
acggccgagtgggccacctggggccggggcggctttgacccacgcgaccaacgtgtcgac
cgcaagggacggcccattgagcggtag
DBGET
integrated database retrieval system
