Syngnathus scovelli (Gulf pipefish): 125967369
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Entry
125967369 CDS
T08785
Name
(RefSeq) PR domain zinc finger protein 5 isoform X1
KO
K22534
PR domain zinc finger protein 5 [EC:2.1.1.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125967369
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125967369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
PRDM2_PR
zf-C2H2_6
zf-met
zf-C2H2_11
zf-Di19
SET
zf-C2H2_8
Trm112p
zf-C2H2_3rep
zf-H2C2_5
Zap1_zf1
zf-C2HC_2
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
125967369
NCBI-ProteinID:
XP_049574368
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MLGMYVPDRFSLQSSKVQDGIGLFTARRVKKGEKFGPFAGEKKLPCELDESADTRLMWEV
RGSKGDVLYILDASNPRYANWLRFVHQAPSQEQKNLAAIQDGENIFYLAVDDIETDTELL
IGFLDSDMEEEEEEEEDEEVSKDEDESSKEAKHLVEMELVIKKEDHPCLLCESSFPSEEI
LAAHLQSLHQRPGMDEKEFKCRNCGKKFPVKQALQRHVLHCSESVSPSGDSKAHHQCSLC
HSSFTSESSFEQHKEACKGDARFICKEESCGKRFKSKDALKKHKGNVHTGSARRKLTCTI
CNRKCSSSLNLQEHRKIHEIFDCHACDKKFISTNQLKRHMITHSEKRPYTCEICSRSFKR
LDQVTAHKIIHSEDKPYKCKLCGKEFAHRNVYKNHKKTHSEERPFQCDECKALFRTPFSL
QRHLLIHNSERTFKCDQCNATFKRKDTLNVHIQVVHDGHKKYKCDLCEKAFVTPSVLKSH
KKTHTGEKEKICPYCGQKFASNGTLRVHIRSHTGERPYQCPYCDKAFSKNDGLKMHIRTH
TREKPYKCSECNKAFSQKRGLDEHMRTHTGEKPFQCDVCDLSFSLKKMLSRHKLTHNPNR
PMAECQLCHKKFTRNDYLKVHMENVHGETDG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttggggatgtacgtgccggacagattctccctccagtcgtccaaggtccaggatgga
attggtctgttcacggcgcggcgggtcaaaaagggagaaaagtttggccccttcgcaggc
gagaagaagctgccgtgtgagctggacgaaagtgcagacacaagattgatgtgggaggtt
cgtggcagtaagggtgacgtcctgtatatcctggacgccagcaatccgcgctacgccaac
tggctgcgtttcgtccaccaggcgccctcgcaagagcagaagaacctggcagccattcag
gacggcgagaacattttctacttggccgtggatgacatcgaaacggacacagagctcttg
atcggcttcctggacagtgacatggaggaggaggaggaggaggaggaagatgaagaggtc
agcaaagacgaggacgagagcagcaaagaggcaaaacacttggttgagatggaactggtg
atcaagaaggaggaccacccgtgcctgctgtgtgagagcagcttccccagcgaagagatc
ctggccgcccacctgcagagtctgcaccagaggcccggcatggatgagaaagagttcaag
tgcaggaactgcggcaagaagttccccgtcaagcaagcgctgcagcgccatgtgttgcac
tgttccgagtcagtgagcccttcgggagactccaaagcacatcaccagtgttccctgtgc
cacagctcctttacttcagaatccagtttcgagcagcacaaggaggcgtgtaaaggcgac
gcccgcttcatctgcaaggaagagagctgcggcaaacgcttcaagagcaaggacgcgctg
aagaaacataaagggaacgttcacacaggaagtgcgcgaaggaaactgacttgcaccata
tgcaaccgaaagtgctcgtcgtctctaaatctgcaagagcacagaaagatacacgaaata
ttcgactgccacgcatgtgacaagaagttcatctccactaatcagctaaaacgacacatg
atcacacactcagagaagcgtccgtacacatgcgagatctgcagccgttcgttcaagcgc
ctcgaccaggtgacggcacacaaaatcatccacagcgaggacaaaccatacaagtgcaaa
ctgtgtggcaaagaattcgcccatcggaacgtttacaagaatcacaaaaagacccactcg
gaggaaagaccgttccagtgtgacgagtgcaaggccctcttccgcacccctttctcttta
cagcgccacctactcatccataacagtgagcggacgttcaagtgcgaccagtgcaacgcc
accttcaagcgcaaagacacgctcaacgtgcacatccaggtggtgcacgacggccacaag
aaatacaagtgcgacctgtgcgagaaggctttcgtcacgccctccgtcctcaagagccac
aagaagacgcacacaggcgagaaggagaagatctgcccgtactgcggacaaaagtttgcc
agcaacggcacgctgagggtccatatccgcagtcacacaggtgagcgtccctaccagtgc
ccgtactgcgacaaagccttcagcaagaacgacggtctgaagatgcacatccgcacccac
actcgagagaagccgtacaaatgcagcgagtgcaacaaagctttcagtcagaaaagaggc
ctggatgaacacatgaggacgcacacgggagaaaaacctttccagtgtgacgtgtgtgac
ctgtccttcagcctgaagaaaatgctcagtcgccacaagctgactcacaaccccaaccgg
cccatggccgagtgccagctttgccacaagaagttcacgcgcaacgactacctcaaagtg
catatggagaacgtccatggagagacagatggctag
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