Syngnathus scovelli (Gulf pipefish): 125967511
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Entry
125967511 CDS
T08785
Name
(RefSeq) tRNA modification GTPase GTPBP3, mitochondrial isoform X1
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sscv03016
]
125967511
Transfer RNA biogenesis [BR:
sscv03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
125967511
Prokaryotic type
Methyltransferases
125967511
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
RsgA_GTPase
FeoB_N
Dynamin_N
MMR_HSR1_Xtn
SRPRB
AAA_16
Arf
FtsK_SpoIIIE
DO-GTPase2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
125967511
NCBI-ProteinID:
XP_049574641
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MLLSSVHHGVRTVPVIFKTRRWTPLLRHLSSFDGVPPTETIFALSSGHGKCGVAVVRISG
PASSTALRCMAGLTRNLPVPRSALLRSITHPQSKEVLDRGLVLWFPAPHSFTGEDSVEFH
IHGGPAVTAAVLQALGSVPGMRPAESGEFTRRAFQAGKLGLTEVEGLGDLIHAETEAQRR
QALRQMSGELGHLYQGWSQNMKRCLAHVEAFIDFSEDELIEDGVLTRVDGMVQDLQSEVV
RHLRDQRRGERLRSGVQVVIAGATNAGKSSLLNTLCQRPAAIVSPIAGTTRDVVETALDI
GGFPLVLSDTAGLRDTRDLVEKEGVRRARERVAQADLTLVVVDSSLLPTDVKQAPDFLQD
HLRNVLLDQEQIHADLPSDRFLVVLNKADLLPEQQRQMLKVNFGCISGLPHVCVISCHTN
EGLQDFLATLHSRVKTLCGDPLSGAPTLTQARHRSHLQQCVAALDQYQRYRDLDLALAAE
GIRLALTSLGRITGKVGPEEILDIIFKDFCIGK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgctcctatcgtctgtccatcacggagtcaggacagttccagtcatctttaagacaagg
agatggactccactcttaaggcacctgagctcctttgatggagtaccccctactgaaact
atctttgcattatcatcaggccatggtaagtgcggtgttgctgtggtccggatcagtgga
cccgcatcttcaacagccctcaggtgtatggcggggctgacacgcaacctgcctgttcct
cggagcgcattgttaaggagcatcacacatcctcagtcaaaagaggtgctggaccgtggg
cttgtcctttggttcccagctcctcatagtttcacaggagaggacagtgttgagtttcac
atccatggaggtccagctgttaccgctgctgtccttcaggctctaggaagtgtgcctggc
atgaggcccgctgagtctggggagttcacgcgaagagcctttcaagcagggaaacttggg
ctgacggaggtagagggactcggggatctgatccatgccgagactgaggcccagaggaga
caggcgctaaggcaaatgtcaggagaacttggccatctctatcagggctggagtcaaaac
atgaaacggtgtcttgcccatgtggaggccttcatagacttcagtgaagatgagcttatt
gaggatggcgtcttaaccagagtggatggaatggtgcaggatttgcaaagcgaggtagtg
cgacacctgagggaccagaggaggggcgagcggctacgaagcggggtgcaggtggtcatc
gcgggagccaccaatgcggggaaaagtagcctcctcaacacactctgccagagacctgca
gccattgtgtcccccattgccggaaccaccagagatgtggtggagacggctctggacatt
ggtggctttcctcttgtcttgagcgacacagcgggcctcagagatactcgggacctggtg
gagaaagagggcgtccgtcgagctcgtgaacgagttgcgcaagcagatttgactctggtg
gttgtggactcttcacttctccctactgatgtcaagcaagcgccagactttcttcaggac
cacctcagaaatgtcctgctcgatcaggagcagatccacgcagatttaccatctgacaga
ttccttgtggtcctgaacaaggcagacttgctgcctgagcaacagcgccaaatgctgaaa
gtgaactttggatgcatctctggccttcctcatgtttgtgtgatatcctgtcacactaat
gagggacttcaagacttcctcgcaacactgcacagcagagtgaagactttgtgtggcgac
cctctgtctggtgcccctaccctgacccaagcacgccacagatcccacctgcagcaatgt
gtggccgccctggatcagtaccagcgataccgtgacctcgacctggctctggcagcggag
ggcattcgcttggctctcaccagcctgggccggatcaccggaaaagttggacccgaggag
atactggatattattttcaaagacttttgcattggcaaatag
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