Syngnathus scovelli (Gulf pipefish): 125969040
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Entry
125969040 CDS
T08785
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125969040
Membrane trafficking [BR:
sscv04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
125969040
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
125969040
NCBI-ProteinID:
XP_049576672
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MAQCVQSVQEFVQDSFVPMVAVLCSDEAERLTSKNKLNFAELLRPFCRLTSEGHLRDPNN
QLLVVKNLRICVTKVVPSTAPPLSGAALSPGQRHHLDQVVLSCQPQEGAVSTAVAAGDYD
LSFNDEALKCSAPWFSSWRDALTEACASKHFSASTPWFEVYRENFLQSMPASDHEFLNHY
LACLLVVSSGEAVPVEQFVKLSQEQHRIQHSGDFTKPKWFIPNTLKYYVLLHDVGQGDER
RAEAVYEDMKQRYGPQGCYLLKINSRTLVAEQEEQIHDLWTQYLRSQDQADDNVGPTVSS
STDKSGSTAEEPSAKTGGRLEQDSPSASRKADITTGGHGACLTLSDHDRIRQFVQEFTFR
GLLPHIEKNIRQLNDQLVSRKGLSRSLFTATKKWFGGGKAPEKSVNEPKSTGGLLYPPEA
PELQIRKLADLCFLVQHYELAYSCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQGGAVR
PYPAHYMDTAIQTYRDVCRNMVLAERCALLSAEILKSQAKYSEAAALLIKMTSEDSDLRS
ALMLEQAAHCFINMRTRMLRKFAFHMILAGHRFSKAGQKRHALRCYCQAMQVYKGRSWSL
AEDHINFTVGRQSFTLGRPEKAAQAFKQILTNDSRQTAAQQGAFLREYLYVYKTVISRSG
VRLPQLPLPCIHGTATRVYFGHERRLAEGEKQAATHVSLDQEYDAEQAAMWCKLEEQLVA
AANRGVVPANFQPSQCYLNSQTDNLRHPLAVVEEPVVVEVVFRNPLKVPLALSRLSLVWK
FTRDTHAAAATEDAGEELVSNQDALEQESRQTDDVVTTETILDFHLAPEETKMARLRLLP
HRTGCLSITGVVYDLAAASSVETPDDYDGLQKAETIISGKQDLKIRGPRLNHTKEDKMFV
RYGPDRRLEPIVTLPMPLMEVFFLQFPTALLCGEIRKAYVEFCNVSDVSLCGLRVASTHP
EFFTFGNPSAGTPLTPLSPASAENCSAYKTLAAAPGSGAACETLVSADDFGPTSDVVDVP
VGGTLEPGHSVQLPLWLRGPDQEGVHEINFLFYYESPDKGSKISHRVVRHSVFICASRSL
SVQVSAHPSAIPPQQGQDQDGGSTLVFIDVENINTSDAGVREFHIVQVSSGSQHWSLSKC
INPAKDKDCIVSSKERAKLCFRAAPCKAHRASLDCAEMFTFADVNLGDERIVSSATPCGD
FFFRCRRTTESRRADACSSGSRTPSGGRSLGEDLVRVVDECDRLDLNIIVIWKAYVVEDS
KQLILEGQLHVALQAVGEEATSLAPKQDTQEMVLLKFKSDPPPPAVLPSTQLSRLVKSNL
RYSETYAHDFAHDSVCVVPVCLVLSNCCRTDVDITVDLRHKTTSSEWSECACSFTWVGQT
RYRLALCPRQTRHLELKACFLMPGVYNINTHAVSAAPCLDGHHRDAAQPAVAQHGAGPAL
IVITDSSQ
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtgcgtgcagtccgtccaggagtttgtccaggactctttcgtgccgatggta
gccgtgctgtgcagcgacgaggcagagaggctcaccagcaaaaacaagctcaacttcgcc
gagctgctcaggcctttctgccggctcacttccgaaggtcacttgcgggaccccaacaac
cagcttctggtggtcaagaaccttcgcatctgcgtgaccaaggtggtgccgagcaccgcc
ccacctctgtcgggcgctgccctcagcccgggccagcgccaccaccttgaccaggtcgtg
ctctcctgccagccacaggagggcgctgtctctaccgctgttgctgcgggagactacgac
ctcagcttcaacgacgaagctcttaaatgtagcgccccctggttcagttcgtggagagac
gcgctgacggaggcgtgcgcctccaagcatttctcagcgagcacaccctggttcgaggtc
taccgggagaatttccttcagtccatgccggcctctgaccacgagttcctcaaccactac
ctggcctgcctgctggtggtgtcgtcgggcgaggcggtgccagtggagcagtttgtcaag
ctgtcgcaggagcaacaccgcatccagcacagcggagacttcaccaagcccaagtggttc
atccccaacacgctgaagtactacgtactgctgcatgacgtgggccaaggcgacgaacga
cgggccgaggccgtctacgaggacatgaagcagcgctacggccctcaaggatgctacctt
ctcaagatcaactcgcgcacgctcgtcgccgagcaggaggagcagattcacgacttgtgg
actcaatacctgcgcagccaggatcaagcggacgataatgtcggtcctactgtgagctct
tcgacggataaaagcggcagcacagcagaggagccttctgcaaaaacaggtggccgtctg
gagcaggactcgcccagcgcctcaaggaaggcagacattacgacaggaggccatggcgcg
tgtctgaccctcagcgaccacgaccgcatccgccagtttgtccaggagttcaccttcaga
ggcctgctgcctcacatcgagaaaaacatcaggcagctcaacgaccagctggtgtcccga
aaaggcttgagtcgctccctcttcacagccaccaagaagtggttcggtggcggcaaagcg
cccgaaaaaagcgtcaacgagcccaagagcaccggcggcctcctctaccccccagaggcc
cctgagctgcagatcaggaagttggccgacctgtgcttcctggtgcagcactacgagctg
gcctacagctgctaccacacggccaagaaggacttcctgtcggaccaggccatgctttac
gccgccggcgccctggaaatggccgccgtctcggccttcctgcaaggcggagccgtgcgc
ccttatcctgcccactacatggacacagccatccagacctacagagacgtctgcaggaac
atggtgctggctgagcgctgcgctctcctcagcgccgagatcctcaagagtcaagcaaaa
tactcggaggcggctgcactgctcatcaaaatgacaagtgaggactcagacctgcgtagt
gctctgatgttggagcaggcggcccactgcttcataaacatgcgcactcgcatgctgcgc
aagtttgccttccacatgattctggcgggtcaccgcttcagcaaagcgggccagaagagg
cacgcactgcggtgctactgccaggccatgcaggtgtacaagggcaggtcgtggtccctg
gccgaggaccacatcaacttcaccgtcgggcgccagtcgttcacgctgggccggcccgag
aaggccgcgcaggccttcaagcagatcctgaccaacgacagccggcagacagccgcgcag
cagggcgcgttcctcagggagtacctctacgtttacaagacggtgatcagccggagtggt
gtgcgtctgcctcagctgccgctgccatgcatccatggcactgccaccagggtctacttt
gggcacgagcgccgcctagccgagggtgagaagcaggctgcaacgcacgtgtcactggat
caggagtatgatgccgagcaggcggccatgtggtgcaagctggaggagcagctggtggct
gctgccaatcgaggggtggtccccgccaactttcagcccagccagtgctacctcaacagc
cagacggacaatctgcgccacccgctggccgttgtggaagagccggtggtggtggaggtg
gtgttcaggaaccctctgaaagttccgctggcgctatcccgcctctcgctggtctggaag
tttacgcgcgacacccacgctgctgccgccacggaggacgccggagaagaactcgtcagc
aaccaggacgcgttggagcaagagtcaaggcagacagatgatgtggtcaccaccgagacc
atcctggacttccacttggcccccgaggaaaccaaaatggctcgactcaggctgctgccg
caccggacgggctgcctgagtatcacgggcgtggtctatgacctggctgctgcatcctcg
gtggaaacgccggacgactatgacgggctgcagaaggccgagacaatcatcagcggcaag
caggacctgaagatcagaggcccgcgactcaatcacaccaaagaggacaaaatgtttgtg
cgctatggacctgaccggcgcttggagcccattgttacgctgccgatgcccctcatggag
gtgttcttcctgcagttcccgacagcgctgctgtgcggcgagatccgcaaggcgtacgtg
gagttctgcaacgtgagcgacgtgtccctctgcggcctacgcgtggcgtccactcacccc
gaattcttcacattcgggaatccgtcggccggcacgccgctgacgccgcttagccccgcc
tctgccgagaactgctcggcctacaaaaccctagcggcggcacccgggtccggcgcggcc
tgtgagacgctggtgtctgccgacgactttgggcccacgtctgacgtggtggacgtcccc
gtcggcggcacgctggagccaggacattccgtgcagctcccgctctggctgcgaggacct
gaccaggaaggagtccacgagatcaacttcctcttttactatgaaagcccagacaaagga
agcaagatcagccaccgggtggttcgtcactcggtgtttatttgcgccagtcgctctctc
agcgttcaagtgtcggcccaccccagcgccatacctcctcagcaaggacaggaccaggat
ggcggcagcacgctggtcttcatcgatgttgaaaacatcaacacgagcgacgctggcgtg
cgcgagttccacatcgtccaagtttccagtggcagtcaacactggagcctcagcaagtgc
atcaacccggccaaggataaagactgcatagtaagcagcaaagagcgagccaagctttgt
ttcagagcggcaccgtgcaaagctcaccgagcttccttggactgcgccgagatgttcacc
tttgccgacgtcaatctgggtgacgagcggatcgtaagttcggccacgccctgcggcgac
ttcttcttccgctgccgccggacgaccgaatctcgccgtgccgacgcctgctcctcgggg
tcaaggacgccctccggcggcagaagcctgggcgaggacttggtccgtgtggtcgacgag
tgcgaccggctggacctcaacattattgtcatctggaaggcttacgtggtggaggacagc
aagcagctgattctggaaggtcaactacacgtggcactgcaggcggtgggcgaagaggcc
acttccctcgctcccaagcaggacactcaggagatggttctgctcaagttcaagtcggat
ccgccacctcccgccgtgctgccatccacgcaactgtcacgactcgtcaagagcaacctg
cgctactcggagacatacgcgcatgactttgcacacgacagtgtttgtgtggttcccgtt
tgtttggttttgtccaactgctgccggactgatgtcgacatcacagtagacctcaggcac
aaaaccaccagttctgagtggagcgagtgcgcgtgtagcttcacctgggtcggccagacc
cgctaccggctggcgctttgtccccggcagacgcgtcacctggagctgaaagcctgcttc
ctcatgcccggtgtctacaacatcaacacgcacgcggtcagcgctgcgccgtgtctcgat
ggccatcaccgtgacgccgcccaaccggcggttgcgcagcacggcgccggaccggcgctc
atcgtcatcaccgacagcagccaatga
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