Syngnathus scovelli (Gulf pipefish): 125969280
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Entry
125969280 CDS
T08785
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00052
Galactose metabolism
sscv00511
Other glycan degradation
sscv00531
Glycosaminoglycan degradation
sscv00600
Sphingolipid metabolism
sscv00604
Glycosphingolipid biosynthesis - ganglio series
sscv01100
Metabolic pathways
sscv04142
Lysosome
Module
sscv_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
125969280
09103 Lipid metabolism
00600 Sphingolipid metabolism
125969280
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
125969280
00604 Glycosphingolipid biosynthesis - ganglio series
125969280
00511 Other glycan degradation
125969280
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125969280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125969280
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
125969280
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125969280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
125969280
NCBI-ProteinID:
XP_049577136
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MIRTSAPQDAVERLRISACTCKKTQFEYRNKKQTLSCSSRRTWKGYWGGIVMSLLGLTRF
LLLLLVGLSAAAPPSFQIDYQNDCFRKDGEKFRYISGSIHYSRIPRAYWKDRLLKMYMAG
LNAIQTYIPWNFHEDSPGIYDFSGDRDLEHFLQLAQDVGLLVILRPGPYICAEWDMGGLP
AWLLQKKDIVLRSSDPDYIAAVDRWMGRLLPMMKPFLYQNGGPIISVQVENEYGSYFTCD
YNYMRHLYKLMRSYLGQDVVLFTTDGASIGFLKCGAIQGVYATVDFGPGSNVSAAFATQR
FAEPRGPLVNSEYYTGWLDHWGSPHSTVSTKNVAVTLNEILAMGANVNLYMFIGGTNFGY
WNGANLPYSAQPTSYDYNAPLTEAGDLTEKYFAIREVIKMYRKIPEGVVPPSSPKFAYDA
VKMQQLQTVSEALDTISFSGPVESMFPQTFIDLNQAFGYVLYRTELPMNCSTPTPLSSPL
NGVHDRAYVSIDGVASGILQRNKVLSINVTGKAGSQLDVLVENMGRINYGNGINDFKGLV
SNLTLNNVVLKGWTMYSLSIDQAVAQGLLWETKPTSASPLPPAALSLPAFYGGTFIIPSG
IPDLPQDTFISMPKWRKGQVWINGFNLGRYWSAQGPQLTLFVPASILSTDFPNNVTILEL
EVSPCLLGPCTVEFTTMPILNATVHSDHRQRWPLFRKDLL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgattagaacttccgcaccacaagatgccgtagaacgacttcgtatctctgcttgcaca
tgtaagaaaacccaatttgagtatcgtaacaagaaacaaacgctttcatgtagttcaaga
agaacctggaaaggttattggggaggaatagtcatgtcgctgctgggtctcacaagattc
ctcctactgctgctcgttggactgtcggcagctgctcctccgtccttccaaattgactac
cagaacgactgcttccgcaaagatggagagaagttccgctacatctcgggcagcatccac
tatagcaggatcccaagagcctactggaaggaccggctgctcaagatgtacatggctggc
ctgaatgccatccagacgtatattccatggaacttccacgaggactccccaggcatttat
gacttcagcggtgatcgagatttggaacatttccttcagctggctcaggatgtcggtctg
ctggttatccttcgaccagggccttatatttgcgccgagtgggacatgggaggactacct
gcctggcttctccaaaagaaagacattgtgctgcgctcttcagatccagattacatagca
gcagtggatcgctggatgggcaggttgcttccgatgatgaagcctttcctctatcagaat
ggcggccccatcatcagtgtgcaggtggagaatgaatacggcagttatttcacttgcgac
tacaactacatgcgtcacctctacaagctgatgcggtcctatctgggccaggacgtggtg
ctgttcactactgacggagcctccattggttttctcaaatgcggcgccatccaaggcgtt
tacgccacagtcgactttgggccaggttccaatgtgtcagcagcgtttgctacgcaacga
tttgcagaacctcgtggacctttggtgaattctgagtactacactggctggctggatcac
tgggggtcgcctcactccactgtctctaccaaaaacgtggccgtgaccctcaacgagatc
ctggcaatgggtgccaacgtcaacctatacatgtttattggcgggaccaattttggatac
tggaatggtgccaatttgccctactccgctcaaccgaccagttacgactacaatgctccg
ctcactgaggccggcgacctcaccgagaaatactttgcaatccgggaggtgatcaaaatg
taccgcaaaatacccgaaggggtcgtcccgccatcaagtccaaagtttgcatatgatgcc
gttaaaatgcagcagctccagacggtgtctgaagctttagataccatctccttctctggt
ccagtggagagcatgttccctcagacgttcattgacctcaaccaggcgtttggctatgtg
ctctacaggactgagctgccaatgaactgcagcactcccacgccgctatcatcgcccctg
aacggggtccatgatcgagcatatgtgtctatagatggagttgcttctgggattctgcag
aggaacaaagttttaagcatcaacgtgacaggcaaagctggcagtcaacttgacgtcttg
gtggagaatatgggccggatcaactatggaaatggcatcaatgatttcaagggcctcgtg
agcaacctgacgttgaacaacgtcgtgctcaaagggtggaccatgtacagcctcagtatc
gaccaagcggtcgcccagggcctcttatgggaaacaaagcccacgtcggccagcccactt
ccccccgctgccctgtcacttccggccttctacggaggaactttcatcattcccagcggc
atcccggatctacctcaagacaccttcatcagcatgcccaaatggcgaaaggggcaggtt
tggatcaacggtttcaatttgggacgctattggtcggcgcaaggcccccagttgactctt
ttcgtcccggcaagcatcctcagcactgattttcccaacaatgtgacaatcctggagctg
gaggtgagcccgtgcctcttaggaccatgcacggtggagttcacaaccatgcccatcctg
aacgcaacggtgcacagcgaccacaggcaacgctggccgctgtttagaaaggatttgctt
taa
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