Syngnathus scovelli (Gulf pipefish): 125969599
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Entry
125969599 CDS
T08785
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125969599
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125969599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
125969599
NCBI-ProteinID:
XP_049577801
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLLERDRDLDALAGVHPNVGGAPAAVRGMKRGDPEPDGQTAASL
VDSTGAECKRPRMDCSGGIGDIGQNNDPLTLGYHGYPPHSQGSQDSTSGQEGLVPPPFAA
FPPPPPPPPQNGLALDYGGSLYAAGAVQGPVEAGGAVNSVVNVVNSLGGQSDGSSQIDGQ
SGSGGGGGSGGGSIGDDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNE
RGSKGFGFVTFETSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKITTPYTNGEGLA
ALPYAGWKLSPVMGAMYSPELYTVPGFPYPAAAAAAASTAAATFRGAHLRGRARPVYSAV
RAAVPQPAIPTYPGVMAYQEGFYSAADLYGGYATYRYAQPTAVATPAAAAAAAAAYSDSY
GRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFTPY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctatcatgctgcccgtgtcccgtggacttctggag
cgggatcgagatcttgacgccctggccggagtgcatcccaacgtgggcggcgctcctgct
gctgtccggggaatgaagcgtggagacccggagcccgatggccagacagcggcctccctg
gtcgactcgacaggggctgagtgcaagcgccctcgaatggattgctcgggagggattggc
gacattggacagaataacgatccgctgaccctcggttaccatggatacccccctcacagc
cagggttcccaagatagtacttctggtcaggagggactcgtaccgccgcctttcgcagcc
ttccctcctcctcctccaccccctccccagaacggccttgccctggattacggtggcagt
ctgtacgcggcgggcgccgtgcagggcccagtggaagccggcggcgcggtgaacagcgtc
gtcaatgttgtcaacagcctcggtggccaatcagatggctcctcgcagattgatggccag
tcaggctcaggaggaggagggggtagcggcggggggagcattggagatgattcagacgcc
aaggggacacccaaacgcctccacgtgtccaacattcccttccgcttccgagacccagat
ctgcggcagatgtttgggcaatatggcaaaattcttgatgtcgagatcattttcaacgag
agaggatccaagggcttcggttttgtaacattcgagacgagcgcagatgcagagagggcc
cgagagaagctccatggtaccctcgttgaaggacgtaagattgaggtcaacaatgccacg
gccagagtgatgacaaacaagaagattacaaccccgtacactaatggagagggtcttgct
gctctaccatatgctggctggaagttaagtcctgtgatgggagccatgtacagtcccgag
ctctacacggtgccagggtttccctacccagcggcagctgcagcggcggcctccacagcc
gcggcgaccttccgcggcgctcatctgcgaggtcgcgcacggcccgtgtacagtgcagtc
agggcggctgtgccgcaacctgccatccccacctaccctggcgtgatggcctatcaggaa
ggtttttacagtgccgctgatctttatggaggctacgccacgtatcgttacgcccagccg
acagccgtagccacacccgcggcagcggcggcggcggcagcagcttacagtgacagctac
ggacgagtctacacagctgacccctaccatgctgcacttgccccagctgcctacggtgtt
ggagccatggccacgctgtacagggggggctacagtagattcaccccttattaa
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