Syngnathus scovelli (Gulf pipefish): 125972801
Help
Entry
125972801 CDS
T08785
Symbol
si:ch73-63e15.2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125972801 (si:ch73-63e15.2)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125972801 (si:ch73-63e15.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
UPF0524
Zot
Motif
Other DBs
NCBI-GeneID:
125972801
NCBI-ProteinID:
XP_049582745
LinkDB
All DBs
Position
Unknown
AA seq
1492 aa
AA seq
DB search
MSLMQFWTKLYSQLGRPLPKDLSCIDDLSTNSLFSSPADSLSEYADAQSFISTDHLDTVP
TLWDINTSTTTTNNGAATTPAQNQLELKGSSRFQGLASLDDITAIISVPPLGGFQTQRAQ
SPPEEEEEAEEEDSEELGHVDTYAEYRPSKSTIGISHPDIVVETNTLSSVPPPDITYTLS
IPEPTINNGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRTVAGIILENY
LKGRKKSLWFSISNDLKFDAERDLKDIDAPTIPVHALNKIKYGDTATSEGVLFATYSALI
GESQAGGQHRTRIKQILDWCKPDFDGVIIFDECHKAKNATSTKMGKAVLDLQNKLPRARV
VYASATGASEPKNMIYMSRLGIWGEGTPFRAFDDFLHAIEKRGVGAMEIVAMDMKVSGMY
IARQLSFSGVSFRIEEIGLDSDFKLVYNKAAKLWAEALQVFMRAADELGLVSRKSLWGQF
WSSHQRFFKYLCIAAKVRCLVELAKKELEAGKCIVIGLQSTGESRTREVLDENDGHLDRF
VSAAEGVFQSLVTKHFPSEKQRREKAPGNKRKRKPRARHPKVPKHTVDSVGVISINSDDS
STDSDGMDTDSNSSPDSLLDNDDVIFVNHTSCHTVRIEEMKQGLLNKISQLGKELPLNTL
DELIDKFGGPDKVSEMTGRKGRVVRRPEGIVRYESRAEQGLTIDHINIKEKDRFMSGEKL
VAIISEAASSGISLQADKRIKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYIF
LISELAGERRFASIVAKRLESLGALTHGDRRATETRDLSKYNFENKYGTKALDKITKAIL
GHIENKVPVPKDYPGGDAMFFRDMKHGMMDVGIFCRESRFGINTEKDCSVTKFLNRILGL
EVHKQNHLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYEEKQEIFMTVGNPQDG
QVVLYQISVDRGMPWDEASNRFLSLTGADEGFYMSRKPRGNQLCVLLAEQGRGKNFIVYK
PNIGKQTHPESLENLQQRYRKVTPEEAKDCWESRFSFSLKKCSHANWNGKCKKVEEGQEC
FQGMRLRQYHMLCGALLRVWKRVSDVVSDITNSNILQIVRLKTKQHNKQVGIKIPENCVA
RVREELMLMDEEVKRRRKEREKQAMEQRLAEERMRKMEQDNKHLLANLFSQKAMPTQSLA
HSLVHGQLLKQKLNPLQKTQVAGMSQLQRMQAVLQQQQQQQQQHPQGQPLLSLPPNPQVT
PSGWAGKSAASKQAAAPRNPVVHGANFSQFYRHSFLPSFPQPLHIHQGMSSQKGQEEVLD
LTISSPSPSPDSTEAGLGLTGPAAPFTDDFNLQSLISQMATQLPPAPPPPPPPLNHNHLR
NNHQDLLDLFDLPLSPPMPTQKASPSSSASSSSSSTSSLVQSSLFSNPPSSCSSSQFPPP
RFPNFLLPQSDSLPLPNGHCSSGALDVREALNSMLQAAGPDRKSVIHYRQQD
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcatgcagttctggactaaattgtattcacagctgggacggccactccccaag
gatctgtcctgcatcgatgacctctccaccaattccctgttctcctctccggccgactca
ctgtccgaatatgccgacgcccagtccttcattagcaccgatcacctggacacggtgccc
acgctctgggacatcaacacgagtaccaccaccaccaacaacggcgccgccactacacca
gcacagaaccagctggagcttaaaggctccagcaggtttcagggcttggccagtttggat
gatataaccgctataatcagcgtgccacctttaggaggatttcagactcagagagcccaa
tcacccccagaggaagaggaggaagcagaggaagaggattcagaggaactgggccatgtc
gacacgtatgctgagtacagaccttccaaatccacgatcggaatttcccatcccgacata
gtggtggagaccaacactctgtccagcgtccctcctccggacatcacatacactctatct
atacccgagccgaccattaacaacggcctgctgtccgccctgcagctagaagccatcatc
tacgcatgtcagcaacacgaggtcatcctacagaacaaccaacgggcaggcttcctgatt
ggagatggcgccggcgtgggaaagggacgtactgttgccggaatcatcctggaaaactac
cttaagggaagaaaaaaatcactatggttcagcatatccaatgacctgaaatttgatgca
gagcgagatctcaaagacatagatgcaccgactattcccgtgcatgccttaaacaaaatt
aagtatggagacacagctacctcagaaggagtcctctttgcgacctactctgcgctgatt
ggcgagagccaggcgggtgggcagcaccgcacgcggattaaacagatcctggactggtgc
aagccggattttgacggagttattatttttgatgaatgccacaaagccaagaatgctacg
tcaacaaagatgggcaaggcggtgcttgatctgcagaacaagctgccacgggccagagtg
gtgtatgccagtgccacaggtgcctctgagccaaagaacatgatctacatgagccgcctg
ggtatctggggtgagggcacgcctttcagggcctttgacgacttcctgcacgccatcgag
aaaagaggcgtgggcgccatggagattgttgccatggatatgaaagtgagcgggatgtac
atagccaggcagttgagcttctcaggggtgtctttccgcattgaagagatcggactggac
agcgactttaagctggtctacaataaagccgccaaattgtgggcagaagcactgcaggtc
ttcatgcgcgccgccgacgagctgggcctggtcagcaggaagtccctgtggggccagttc
tggtcgtctcaccagcgctttttcaaatacctctgtatagctgccaaggtccgctgcctg
gtggagttggccaagaaagagctggaggcaggaaagtgcatcgtcattggcctgcaatct
accggggagtcgcgcaccagagaggttctggacgagaatgatggtcaccttgaccgattt
gtctccgccgcagagggagtattccagtctcttgttaccaaacatttcccttctgagaag
cagaggagagagaaggcaccggggaacaagagaaaacgcaagcctcgagctcgccatccc
aaggtacccaagcacacggtggacagcgtcggcgtcataagcatcaacagcgacgacagc
agcaccgactctgacggcatggacacggattccaactcgtctccggactcgctgctggac
aacgatgatgtcatttttgtcaaccacacgagctgccacactgtcaggatagaggagatg
aagcagggtctcctcaataagatttcacaactgggaaaagaactacctctcaacaccctg
gacgagcttattgataagtttggagggcctgataaagtctctgagatgaccgggcgtaag
ggtcgtgtggtgcgacgtcctgaaggtatcgtccgttacgagtcacgcgctgagcagggc
ctcaccattgaccacatcaacatcaaggagaaagaccgcttcatgagtggagagaagctg
gtggccatcatctccgaagcagccagctctggaatttccctgcaggcggacaagaggatc
aaaaaccaacggcggcgagtccacatgacattggagctaccttggagcgcagacagggcc
attcagcagtttggccgtacccatcggtccaatcaagtgacagctccggagtacatcttc
ctcatctcggaacttgccggcgagagacgtttcgcctccattgttgcaaagagactggaa
agcctgggcgcgttaacacacggagacagacgggcgactgaaaccagagacttaagcaag
tacaactttgagaacaagtatggtaccaaggctctggataaaatcaccaaagcaatcttg
ggccacatagagaacaaggtgcccgtgcctaaagattaccccggaggtgacgccatgttc
ttcagagatatgaaacatggaatgatggatgtgggcatcttctgccgggagtctcgcttt
ggcatcaatacagagaaagattgcagcgttaccaaattcctaaaccgaatcttggggctg
gaggtccacaagcagaaccatctcttccagtatttcacagacaattttgattacctaata
gaaaaagacaagaaagagggcaaatatgacatgggcatcttagatttggctccaggtaac
gatgaaatttatgaggagaagcaggaaatctttatgacagtggggaaccctcaggatggc
caggtggttctttaccagatcagtgtggacagaggtatgccttgggatgaagccagcaac
aggtttctcagtctcactggtgcagacgagggcttctacatgtcccggaagcctcgaggt
aaccagctttgcgtgttgctcgccgagcaagggagaggcaagaactttattgtttacaag
cccaacatcggcaagcagactcatcctgaaagccttgaaaacctgcagcaacgctatcgg
aaggtgactccagaggaggccaaggactgctgggaaagccggttcagtttctccttgaaa
aagtgtagccatgctaactggaacggcaaatgcaagaaagtggaggaaggccaggagtgc
ttccagggtatgcgtctgcgccagtaccacatgctgtgcggcgctctgctgcgcgtttgg
aagcgcgtgtccgacgtggtgtccgacatcaccaactccaacatcctgcagattgttcgc
ctcaagaccaagcagcacaacaagcaagttggcatcaagatcccagagaactgcgtggcc
cgggtgcgggaagagcttatgctaatggacgaggaggtaaagcggaggcgtaaggagcgt
gagaagcaagccatggagcagcgtctggctgaggagcgcatgcgcaagatggagcaggac
aacaagcacctgctggcaaatctgttcagccagaaagccatgcccacacagtcactggcc
cattcgctggttcacggtcagctcctcaagcagaaactgaacccgctgcagaagacgcaa
gtggcgggcatgtctcagctgcagaggatgcaggctgtcttgcaacagcagcagcagcaa
cagcagcagcacccacagggtcaacctctgctgtctttacccccaaacccccaagtgact
ccgagcggctgggccggcaaatcggccgcctctaagcaggcggcggcgccgcgcaacccg
gtcgtccacggcgccaacttctcccagttttaccgtcattccttcttaccctccttcccg
cagccccttcatatccatcagggcatgtcttcccaaaagggccaggaggaggtgctggac
ctaaccatcagctcaccgtcgccctctccggacagcaccgaggccgggctgggtctgacg
ggtccggcggcgccgttcaccgacgactttaacttgcagtcgctcatctcgcagatggct
actcagcttccgccggcgccgcctcctcctcctccgcctctgaaccacaaccacctgaga
aacaaccaccaggacttgctggaccttttcgacttgcccctctcgccgccgatgcccacg
cagaaagccagcccttcgtcctccgcctcgtccagctcctcgtccacatcctccctcgtc
caaagctcgcttttttccaaccccccgtcctcgtgctcttcctcgcaattccccccacct
cgcttccccaactttctcctcccccagtcggactcgctccccctgcccaacggccactgc
agctcgggcgctctggacgtgcgcgaggctctgaacagcatgctccaggcggcggggccc
gaccgcaagtccgtcattcactaccgccagcaagactga
DBGET
integrated database retrieval system
