Syngnathus scovelli (Gulf pipefish): 125975342
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Entry
125975342 CDS
T08785
Name
(RefSeq) ATP-binding cassette, sub-family B (MDR/TAP), member 4 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125975342
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125975342
04147 Exosome [BR:
sscv04147
]
125975342
04090 CD molecules [BR:
sscv04090
]
125975342
Enzymes [BR:
sscv01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125975342
Transporters [BR:
sscv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125975342
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125975342
CD molecules [BR:
sscv04090
]
Proteins
125975342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
Zeta_toxin
AAA_16
Rad17
RsgA_GTPase
AAA_15
AAA_21
AAA_5
AAA_29
G-alpha
AAA_7
AAA_30
Dak1
DNA_pol3_beta
Motif
Other DBs
NCBI-GeneID:
125975342
NCBI-ProteinID:
XP_049586735
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MGETDKLERNVKDIYLSDHKDEAGKTKKEKKEKLPMVGAMELFRFADTKDLALLFFGTLM
SMVHGIVLPLMLVVFGDMTDSLISDATINYLNNSNPNMTFPNSTLQEDMTGFAIYYSILG
AIVLVAAYMQVAFFTLSAGRQTKRIRKFFFHSIMRQDIGWFDVNETGELNTRLTDDVYKI
QEGIGDKVAMLIQSCSTFITSVVIGFSKGWKLTLVILAVSPLLGIMAAIFSKVLASFTSR
EQSAYAKAGAVAEEVLSSIRTVFAFSGQRREIERYHKNLEDAKNVGIKKAISSNIAMGVT
FLLIYLSYSLAFWYGSTLILSGEYTIGVVLTVLFAVLIGAFALGQTSPNVQSFSSARGAA
HKVYSIIDNVPNIDSFSESGFKPDSIKGNITFKNIHFNYPSRPEVKVLNNMSLSVTSGQT
MALVGSSGCGKSTTIQLLQRFYDPQEGSVFIDGHDIRSLNIRYLRKMIGVVSQEPVLFAT
TIAENIRYGRSDVTQLEIERAAKEANAYDFIMNLPDKFDTLVGDRGTQMSGGQKQRIAIA
RALVRNPKILLLDEATSALDAESETIVQAALDKVRLGRTTLIVAHRLSTIRNADVIAGFK
NGAVVELGTHSQLMEKHGVYQTLVTMQTFQKAKDEEDEEDVENKSIPNSPLMRRRRSTKT
SSFSGSEGKKEEKENLVDGKDTTQEVSWILAKNNSKYNFFFSRLPQDENVPPVSFLKVMR
FNLPEWPYIFVGTICASINGAMQPLFAVIFSKIITVFAEPDVNVVRQKSEFFSLMFAVIG
GISFFTMFLQGFCFGKSGELLTMKLRLAAFKAMMRQDLGWFDNHKNSVGALTTRLATDAA
QVQGATGLRLATLVQNLANMGTALILSFVYGWELTLLILSVVPVMAVAGTVQMQLLAGQA
AQDKKELEKAGKIATEAIENIRTVASLTREPKFESLYHENLIVPYNNSQKKAHVYGFTFA
FSQAMIYFAYAGCFRFGAWLIDQKRMDVEGVFLVISAVLYGAMAVGEANSFTPNYAKAKM
SAAHLMMLLNTEPAIDNLSEEGESLEQFDGSVRFEDVKFNYPSRPDVPILRGLNLKVSKG
ETLALVGSSGCGKSTTIQLLERFYDTTQGKVVIDSKNVKDLNIHWLRSQVGIVSQEPVLF
DCSLAENIAYGDNSRTVTMEEIKAAAEKANIHSFIEKLPKKYDTQAGDKGTQLSGGQKQR
IAIARAILRNPKLLLLDEATSALDTESEKVVQEALDKASQGRTCIVVAHRLSTIQNADRI
AVFQGGVVVEEGTHQQLLAKKGVYHMLVTTQMGHGRE
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacggataaactggagaggaacgttaaagatatttatttaagtgatcataaa
gatgaagccggtaaaacgaagaaagaaaaaaaagaaaagttacccatggttggtgccatg
gaactgttccggtttgcagataccaaagacctcgcgctgttgtttttcgggaccctgatg
tcgatggtccacgggattgtcctgcctcttatgttggtcgtgtttggagatatgacggac
agccttatatccgatgctaccattaattacttgaacaacagcaaccccaatatgactttt
ccaaacagcaccttacaggaagacatgaccggctttgccatctactactccatcttaggg
gccattgtactggtggccgcctacatgcaggttgcgttcttcaccttgtcagctggacga
caaaccaaacgcatccggaagtttttttttcacagtatcatgcgacaggacatcggctgg
tttgatgtcaacgagacgggagagctcaacactcgccttacagacgatgtctataagatc
caagagggtatcggagacaaggtggccatgttaatccaatcgtgttccaccttcatcaca
tctgtagtcatcggtttcagcaaaggatggaagctgactctcgtcatactggccgtcagc
cccttgttaggcatcatggcggcaattttcagtaaggtgctagcatcgttcacatctcga
gaacagagtgcctatgccaaagcgggcgctgtggcagaagaggtgctttcttccatcagg
actgtgtttgccttcagtgggcaacgcagagagattgagaggtatcataaaaatttggaa
gatgccaagaacgtgggaatcaaaaaggcaataagttcaaacatcgctatgggcgtcacc
ttcttattgatctacctgtcttactctttggccttctggtacggaagcaccctcattttg
agtggagagtacaccatcggcgttgtacttacagttttatttgctgtcctcatcggagcg
ttcgccttggggcagacgtcgccgaatgttcagtccttttccagcgccagaggagccgcg
cataaagtttacagcattattgacaatgtaccaaatatcgacagcttttcagagagcggc
ttcaaacctgactccatcaaaggaaatataacgttcaagaatatccactttaactatcct
tcaaggcctgaagtcaaagtattgaacaacatgtccttgagtgtgacgagtggacagacc
atggccttagttggaagcagcgggtgtgggaagagcaccaccatccagctcctacaaaga
ttctatgatcctcaagagggatccgtatttatcgacggccatgacatccgttccctcaat
atccgctacttgcggaagatgattggcgtggtgagtcaagagcccgtccttttcgccacc
accatagccgagaacatccgatacggccgaagcgacgtgacgcagctggagattgaacga
gccgccaaggaggccaacgcttacgacttcatcatgaaccttcccgataagtttgacacg
ctggttggagaccgagggactcagatgagtggaggacagaagcagaggatcgcaattgcc
cgggcgctagtccgtaaccccaaaatccttctgctggacgaagccacgtctgctcttgat
gccgagagtgagacgattgtgcaggctgctcttgacaaggttcgactgggtcgtaccacc
ttaatcgtggcccatcgcctttcgacgatcagaaacgccgacgtcatcgccggcttcaaa
aacggagccgttgtcgagctggggactcacagccaactgatggaaaaacatggcgtctac
caaacgctcgtcactatgcagacttttcagaaagctaaggacgaggaggatgaagaagac
gttgaaaacaaaagtatcccgaattccccgttaatgaggaggaggagatctacaaaaacg
tcttcattttctggttcagaagggaaaaaagaagagaaagaaaatttggtggatggcaaa
gatacaacacaggaagtaagttggatcttagcgaagaataattcaaaatataattttttt
ttttctcgtttaccgcaggacgaaaacgttccgccggtgtcgtttctcaaagtgatgcgt
ttcaacctcccggagtggccttacattttcgtcggaaccatctgcgcttcaattaatggc
gcaatgcaaccactgtttgctgttatcttctccaaaatcatcactgtgtttgccgagccc
gatgttaacgttgttcggcagaaatctgaattcttctcccttatgtttgctgttattggt
ggaatttcttttttcaccatgtttttacagggtttctgttttggtaaatctggagagctt
ctgactatgaaactgagactagcagctttcaaagccatgatgaggcaggacctcggctgg
tttgataaccacaaaaatagcgttggcgccctcacaacaagacttgccacagatgctgct
caagttcaaggggctacgggtctacgtcttgccaccctggttcagaatctggccaatatg
gggacggctctgattctttcctttgtgtacggctgggagctgaccctgcttatattgtcg
gtggttcccgtcatggcggtggctggaaccgtgcaaatgcagttgctagccgggcaagct
gctcaggacaagaaggagctggagaaggccggaaagattgcgacagaggccatcgagaat
attcggacggtggcatctctgaccagagaacccaagtttgagtctctgtatcatgaaaac
ctcatcgttccttacaataactcccagaaaaaagcccacgtgtacggtttcacctttgca
ttttcccaagctatgatttattttgcttacgcgggatgtttccgttttggagcttggctc
atcgaccaaaaacgaatggatgttgagggagtattcctagttatttcagcagtcctgtat
ggcgccatggctgtcggagaagctaattccttcactccgaactacgcaaaagccaaaatg
tccgctgcgcacctcatgatgcttttgaacacggagcctgctattgataatctctcagaa
gagggagagtcgctggagcaatttgacggcagtgtccgctttgaggacgttaagtttaac
tacccctcacgcccggatgtccccattctccgagggctgaatctgaaagtgagcaaggga
gagacactggccctggtgggaagcagcggctgtgggaaaagcaccaccatccagctcctg
gagaggttctatgataccacgcaaggcaaagtggtgattgattccaagaatgtaaaagat
ctgaacatccactggctgagatctcaggtcgggatcgtgtcccaggagcccgtgctgttt
gattgcagcctggccgaaaacatcgcctacggagacaacagtcgaacggttaccatggag
gagattaaagcagctgcggagaaagctaacattcacagcttcatagaaaaactgccaaaa
aaatatgacactcaggcaggtgataaggggacccaactgtcaggtggtcagaaacagcga
atagccatcgcccgagccattctccgtaaccccaaactcttgcttctggatgaagccacg
tctgcgttggacaccgagagtgagaaggtggtgcaagaagcgttggacaaagccagccag
ggtcggacgtgtatcgtcgtcgcccaccgtctgtccaccatccaaaacgcggaccgcatt
gctgtttttcagggaggcgtggtggttgaagaagggacacatcagcagctgctggctaaa
aagggagtctaccacatgctggttactactcaaatgggccatgggagggaatga
DBGET
integrated database retrieval system
