Syngnathus scovelli (Gulf pipefish): 125975619
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Entry
125975619 CDS
T08785
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125975619
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125975619
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
125975619
NCBI-ProteinID:
XP_049587339
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MLSSPTVILQPYGLPVYPQTTTCYPSIVQGGPTQEAGPGGTDPALPQVYAAPPSYPTPGQ
GPAASAGRLPPLEFSSAHPGSEYPEHAQLRVYQGPQLEGAEPLTSTNTEEALAPVASDPQ
ALSVSVASGGSGGGGSGSDDEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEI
IFNERGSKGFGFVTFESAAEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNSD
LSRKTQLGQRLLLFLGFELFVLVRIASGWKINPVMGAMYAPELYTVAGFPYPVAAPALAY
RGSTLRGRGRTIYNTIRSAATPTAVPAYPGVVYQDGLYGAEVYGGYPAAYRVAQTASAAA
AAAAATYSDGYGRVYATAADPYHHSVGPTTTYGVGTMASLYRGGYNRFTPY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgctttcctcacccactgttatcctccagccttatggactgcctgtctacccgcagacg
accacttgctaccccagcatagtccaggggggccccacgcaggaggcgggcccggggggc
accgaccccgccctgccccaggtgtacgccgcaccgccctcctacccgaccccgggtcaa
ggtccagcggcgtcggcgggcaggctgccgcctctggaatttagctcggcacaccccggc
tccgaataccctgagcatgcccagctgagggtctaccagggccctcagctggagggcgcc
gagcctctgacctctaccaacacggaggaagctttggcccctgtggcctcggaccctcaa
gctctgagtgtgtctgtggcatctggcggaagcggcggcggagggagcgggagtgatgac
gaagggtccggcaaggcccagcccaaacgcctccacgtgtcaaacatccccttccgcttc
agggacccggaccttcggcagatgtttgggcaatttggaaaaatcctggatgtagagatt
attttcaacgaaagggggtcaaagggattcgggttcgtcacctttgagagcgcggccgag
gctgaccgagcacgggagaaactgaacgggacgatcgtggaagggaggaagatcgaggtg
aataatgccactgcaagggtagttaccaaaaagccacaaacgccgcttgtgaacagcgac
ctttcacgtaagacacaactaggtcaaaggttgcttctgtttcttggctttgaattattt
gtgcttgtccgtatagcttccgggtggaaaatcaaccctgtcatgggggccatgtacgca
ccggaactctacacagtggccggtttcccctacccggtggcggcgcccgcattggcctac
cggggctcgacgctgaggggtcgaggccggaccatctacaacactattcgctccgccgca
acgcctactgctgtgccagcctacccaggggtggtgtatcaagatggtctctacggagca
gaagtctacggaggttatcctgccgcgtacagggtggctcagaccgcatcggccgccgcc
gccgccgctgctgcaacatacagcgacggatacggccgcgtttacgccacagccgcggac
ccctatcaccactcggtgggaccaacaaccacatatggcgttggcaccatggccagtttg
tatcgaggaggatacaaccgcttcactccctactga
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