Syngnathus scovelli (Gulf pipefish): 125979287
Help
Entry
125979287 CDS
T08785
Name
(RefSeq) beta-hexosaminidase subunit beta isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv00511
Other glycan degradation
sscv00513
Various types of N-glycan biosynthesis
sscv00520
Amino sugar and nucleotide sugar metabolism
sscv00531
Glycosaminoglycan degradation
sscv00600
Sphingolipid metabolism
sscv00603
Glycosphingolipid biosynthesis - globo and isoglobo series
sscv00604
Glycosphingolipid biosynthesis - ganglio series
sscv01100
Metabolic pathways
sscv04142
Lysosome
Module
sscv_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
125979287
09103 Lipid metabolism
00600 Sphingolipid metabolism
125979287
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
125979287
00531 Glycosaminoglycan degradation
125979287
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
125979287
00604 Glycosphingolipid biosynthesis - ganglio series
125979287
00511 Other glycan degradation
125979287
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
125979287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sscv03110
]
125979287
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
125979287
Chaperones and folding catalysts [BR:
sscv03110
]
Intramolecular chaperones
Others
125979287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
DUF4248
Motif
Other DBs
NCBI-GeneID:
125979287
NCBI-ProteinID:
XP_049593318
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MFSSIIVNVCLLLGVSSSCWGNRQETWVDEKLARDTQPSKWGSLWPLPQRVDIFDVSFKL
AAASFQIFDGNTSSAGPSCNLLQNAYRRYYKYMFGGAKSKQPHTQDAFPELMGLQVLITD
PNPECDQYPSVSSDESYELLVDQPIAILKAPKVWGALHGLETFSQLVYEDEFGAKSVNWT
QISDFPRFAHRGILLDTSRHFLPVKVILTNLETMAMNKFNVFHWHIVDDQSFPYMSRTFP
DLSQKGAYHPYTHVYTPSDVKMIVEFARLRGIRVIPEFDTPGHTQSWGKGQADLLTPCFA
GAEPSGSFGPVNPILNTSYDFMSRLFQEVAAVFPDNYVHLGGDEVDFTCWKSNPDIQKFM
EKQGFGKNYSKLESFYIQRLLDIVTSTKKGYIIWQEVFDNGVKLKADTLIHVWKGSEQQY
QNEMANVTAAGYRTLLSTPWYLNRISYGQDWQGHYKADPQDFQGTEAQKKLVMGGEACMW
GEYVDATNLTPRLWPRASAVAERLWSAKDVTDVNDAYARLSSHRCRLVERGIAAEPLFSS
YCPHEFKGI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgttttcttctatcatcgtcaatgtttgcctcctgctgggggtctcgtcctcctgctgg
gggaaccggcaggaaacctgggtcgacgagaagctcgcccgggacacacagccttctaaa
tgggggtcgttgtggccgctaccccagcgagtggacatctttgacgtgtcgttcaagtta
gcagccgccagctttcaaatcttcgacggtaatacgtcgtcggcggggccgagctgtaac
ctcctgcagaacgcctacagaaggtactacaagtacatgtttggtggggctaaatccaaa
cagccacacacacaagacgcctttcctgaactgatgggtctgcaggtgttgatcacagac
ccaaacccggagtgtgaccagtaccccagtgtttcgtccgatgagtcatatgaactgttg
gtggaccagcccattgcaatcctgaaggcaccaaaagtctggggcgccttgcatggtctg
gaaacttttagccagttggtttacgaagatgaatttggggctaaaagtgtcaattggacc
caaatcagtgacttcccccgatttgctcaccgcggcatcttattggacacctcgcgacac
ttcctacctgtcaaagtcattttgaccaatctggaaacaatggctatgaacaagtttaac
gtcttccactggcacatcgtagacgatcaatcctttccctacatgagccgaacattcccg
gacctcagccagaagggggcataccacccgtacactcacgtgtacaccccatccgacgtg
aagatgatcgtggaattcgctcgcctgcgaggcatccgcgtcatcccggaattcgacact
ccgggccacacgcagtcttggggcaaaggacaggcagatcttctgacaccgtgctttgcc
ggcgccgaaccatctggtagctttggcccggtcaaccccatcctcaacaccagctacgac
ttcatgagccgcctcttccaggaggtcgccgccgtcttcccggacaactacgttcacctg
ggaggtgacgaggtggacttcacctgctggaagtccaaccctgacatccagaagttcatg
gagaagcaaggcttcgggaaaaactacagcaagctggaatccttctatattcaacgactt
ttggacatcgtgacctccaccaagaagggctacatcatctggcaggaggtctttgacaat
ggcgtgaagctgaaggccgacacactcatccacgtgtggaaaggcagcgagcagcaatac
cagaatgagatggccaacgtcacggcggccggttaccggaccctactgtccaccccctgg
tacctgaaccgtatctcctacggccaggactggcagggccattacaaggccgacccgcag
gactttcagggaaccgaggcgcagaagaagctggtgatgggcggagaagcctgcatgtgg
ggggaatacgtggacgccaccaacctcacgccgcgactctggcctcgcgccagcgccgtg
gccgagcgtctgtggagcgccaaggacgtgacggacgtcaacgacgcctacgccagactg
tcctcgcaccgctgccgcctggtcgagcgcgggatcgccgccgagccgttgttctccagc
tactgcccccacgagttcaagggaatatga
DBGET
integrated database retrieval system
