Syngnathus scovelli (Gulf pipefish): 125980995
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Entry
125980995 CDS
T08785
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125980995
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
125980995
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125980995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Ribosomal_S14
RRXRR
Motif
Other DBs
NCBI-GeneID:
125980995
NCBI-ProteinID:
XP_049596729
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MAHQRPLVAIITLLGATFGGLLVWRAFSIKKKRPPSVQRETPLPVAAEADRRPTHEEIEV
VECEKTCAAPPVSIPTSDQLLAVRPATVSSEEEWCHLWPLMREDLAAVPVLGLDCEWVSA
NGRAQVVSLLQLASYSGRCMLVRLQAFSDAQLPPDLVEVLRDPHVLKAGVGCHDDGKRLT
HDYGLSLTCAVDLRHLALRQKQVALSNGLGLKSLAADVLNVSLDKSPELRCSDWEANKLT
PEQITYAARDAQVSVALFFHLLGPHLKAHPTCADRLSYAALAAYCQGLVDVPFRGRGAGG
VDEHSDDGSPEKTRRARRPLMGTSSSPDSSMSGDQRVPDPRKNNKRKPLGVGYSARKSPL
YDNCYLHAPDGQPLCTCDKKKAKWYLDKGIGELQSEDPFVVRLLFEPSGRPDSHQDYYLT
AKANLCVVCGRADSYIRKNIVPHEYRRHFPNEMKDHNSHDILLLCTSCHAASNVHDASLK
QQLADEFAAPQGCEEGVRQLEDPDRRRVRSAARALLIAGGGLPKWRQDELRTLVRSFLHV
SDERELKEDELRQAASLETRISNETHVPHGLKVVRAYTQRGPRGLMELERRWRQHFLSSM
RPEHLPKLWCVQHNHQKLLRKYGDDLPVKVD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccaaaggccactcgtcgccatcatcacactcctcggcgccacctttggcggt
cttctcgtgtggcgagcatttagcatcaaaaagaagcgtccgccttccgttcagagggaa
acgccgcttcctgtcgccgcggaagccgaccgacggcccacacatgaggagattgaggtg
gtggagtgcgagaagacctgtgcggcacctcctgtgtccatcccgacttccgaccagctg
ctggcggtgaggccggcgactgtgagctccgaggaggaatggtgccatctttggccatta
atgcgggaagacctggcggcggtccccgtactaggactcgactgcgaatgggtgtcagcc
aatggtcgtgcccaggtggtctccctgctccaactggcctcctattcggggcggtgcatg
ctggtacggcttcaggcgttcagtgacgcgcagctcccaccagacctggtggaggtcctg
cgcgacccgcacgtcctgaaggcgggcgtcggttgccacgacgacggcaagcggctaacg
catgactacgggctttcgctgacctgcgcggtggacctgcgccacctcgccctccgacaa
aaacaagttgcactgagtaacggacttggcctgaagtcgctggcagccgacgtgttgaac
gtttcgctggacaaatcgccagaactccgctgtagtgactgggaggcaaataagctgacg
ccggagcagataacatacgcagccagggacgctcaagtgtccgtcgccctcttcttccac
ctgctcggcccccacctcaaagctcaccccacttgtgccgaccggctttcctacgccgcg
ttggctgcttactgtcaggggttggtggacgtgcccttcaggggccggggggctggcggg
gtggacgagcatagcgatgatggcagcccagagaaaacacggcgagcgcgcaggcctctg
atgggaacctcctcaagccccgacagctcaatgtctggagatcagcgagtcccagacccc
agaaagaacaacaaaaggaagccgctgggcgtgggctactctgcaaggaagtccccgctg
tacgacaactgctacctgcacgcccccgacggtcagccactttgcacgtgtgacaagaag
aaagccaaatggtacctggacaaaggaataggagagctccagagtgaggacccctttgtg
gtgaggcttctgtttgagccgtcaggacgtcctgactcccatcaggactactaccttacg
gccaaggcgaacctctgcgtggtctgcgggagagcagactcttacatcaggaagaacatc
gtccctcacgagtaccggcggcacttcccaaacgagatgaaggatcacaactctcacgac
atcctgctgctgtgcaccagttgccacgccgcctccaacgtgcacgacgcctcgctcaag
cagcagctggccgacgaattcgccgccccgcaaggatgcgaggaaggcgtgcggcaatta
gaagacccggaccggcgccgcgtgcgctcagcagcccgcgccctcctcatcgccggcggc
gggctgcccaagtggcgccaggatgaactgcggacgctcgtccggagcttcctgcacgtg
agcgacgagcgagagctgaaggaggacgagcttcggcaggctgcctctttggagactagg
atttcaaacgagacgcacgtgcctcacggcctgaaggtggtgcgcgcctacactcagcga
ggcccacgcggcctgatggaattggagcggcgctggaggcagcacttcctgtcctccatg
cgccccgaacaccttccgaagctctggtgcgtgcagcacaaccaccaaaagctgctccgc
aagtacggcgatgacctgcccgtcaaagtcgactga
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