Syngnathus scovelli (Gulf pipefish): 125982147
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Entry
125982147 CDS
T08785
Name
(RefSeq) nuclear envelope pore membrane protein POM 121 isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125982147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125982147
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125982147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
125982147
NCBI-ProteinID:
XP_049598369
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MSPRERKVVLLSALGIVSLSLYFFPSYLYIVATLVVCGGAFVLRRGTPLAARIGLNPRTG
FSAPAGYLRRFWDWWLSDVSVVSRRTTLDVCRRDPRGSSLGAFRQRPPGAAIHRGGHIDS
NACLFSPGDVLMGSYIGKPESPTGDFGMPRVVREQLREMLSRPNHAVCTPNRRLSFTREP
SGTVGHFTITPQRHYPLQQPGASPVGVLPPIRWDGFRKKSILSPRNSLAAHSPVTVKIAR
PDHSGPSLEHPSCAAVPKAPEDPCSRESVLKVLKDSHKREVDDADRSFTAEQRSKRRRND
SGGSAHSAFEPLLPNGAPLQLVPKPGSLKRGMIAAAEESTFKRSRTSSISSASGAHAPGG
TPGSNRNPIQSSYSSSVGLAQFKKPSAQSSPMSSPGSSRSQTPDRTAKRPREDDDLSPGP
ASSPPSERAALDKAPDAPKQSPVPKVSVTSSINFAGSGGKRKRRIQLVSSKRDDRFSLPP
PPELGYTITVKDLDEEKAAAMRKIQKVLEPPVAEPQKSSSPSLTSIAPASLTTSVPKSAS
VISGTLTLSSLLAAPLPKPCSIAPSVITPDPEPAPALSNPLLEALKMKSPTSCASAAGAT
TVSTLTMPVPPGVSSLKAQPIADALKPWPVSQSQPARSSVDQTSAFTQVPGQVSKAASGA
PSLPPAGPLTSSSQLGGGPAACSAPKPPLVTTAVLSHSNPLPASGFKPIFAVAASAPLIV
TSLESKPTVQNFNPSFGSSSATAGFATAATSTTVSGTAGATIAPPSCATSATTSGAVSLT
CSLFGSSTSSTVASSLFPEVASTAAATSGSTSSTTPAAQPSTKSIFGTWSAPSSMTASAT
SAPASTPGFQFGAGGSTTPVAAIPAPTSTSAFTFGAAQTTSQVAGQKVFAFGQATVSQNT
STASFGGLAMAAAAPASAANTANDGAAGPTTQPTFTFGKSSFQASGPQSSFGSTLVAPKP
FTFGGGSAASASNAMPFNFGAPATSAAVPSAFVTPSKPAFGGASTAFAFGQAAQTPGASS
FTFGGGGPQQTPSGPAPPPASGGFNFGATISQPQFGTPVANKMGGFNFGAAGTSTPNFRQ
SPATATGPIPFGNASAPVQAFNAAPFGSQATPSFSIGAGSKPSGVRQRLQARRQHNRKK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccagagagagaaaagtagtactactttctgccttaggcatagtcagtctctcg
ctttatttcttcccctcttatctatacattgttgcaactcttgtggtttgtggtggcgcg
ttcgtcttgcgtcgcggaacgccgcttgccgccagaataggcctcaatcctcggactgga
tttagcgctccagccggctacttgcgccgcttttgggactggtggctgagcgacgtttcg
gtggtgtcgcggagaacaacgctcgacgtctgccgacgtgacccacgcgggtcgtcgctg
ggagctttcagacaaaggccgcccggcgctgcgatccatcgcggggggcacatagatagc
aacgcgtgtctttttagccccggggacgttctcatgggaagctacattggcaaaccagaa
agtccgaccggcgacttcggcatgcccagagtggtccgggagcaactgcgggaaatgttg
tccagacctaaccatgctgtctgcaccccgaaccggaggctctcgtttaccagggagccg
tcgggcacagtgggacacttcaccatcaccccccagcggcactacccgcttcaacagcca
ggcgcctccccggtgggggtcctgcctcccattaggtgggatggcttcaggaagaagagc
atcctctcgcctcggaattcactggctgctcatagtccggttactgtcaaaatcgcccgg
cccgaccacagcggccccagtttggagcacccgagctgcgcggctgtgcccaaggccccc
gaggacccctgctccagagagagcgtgctaaaggtgttaaaggatagccacaagcgagag
gtcgacgatgcagatagaagcttcactgctgagcagagaagcaagagaaggcgtaacgac
agtggaggaagtgcccactcagcttttgagcccctcttgcccaacggagcgccactgcaa
ctggtccccaaaccaggaagcctaaaacgagggatgatagcagcagcggaagagtccacc
ttcaagaggtcccgcacctcatccatcagctctgccagtggagcgcacgcccctggaggc
acaccgggttccaatagaaaccccatccaaagctcctacagctcttcagtgggcctcgcg
cagttcaagaagccatctgcgcagagctcgcccatgtccagccctggttcgtctcgttcg
cagacaccagacagaaccgccaagaggccgagagaggatgacgacctttctcccggcccg
gcgtcctccccgccatcagaaagggccgcgttggacaaagcgcccgatgcgcccaaacag
agtccagtgcccaaggtctcagtcacgagctcaataaacttcgccggcagtggtggaaag
cgaaagcgtaggatccagctcgtgtccagtaagcgggatgaccgattttcactcccccca
ccacctgagctgggctataccatcactgtgaaggatctggatgaagagaaggcagcagcc
atgagaaagatccagaaagttctggagccacccgttgctgaaccgcaaaagtcctccagc
ccttcattgacgtccatcgcacctgcctcgttgaccacctcagtcccaaagagcgccagc
gtcatctccggcacactcaccctgagcagcctcctggctgcccctctgcccaaaccctgc
agcattgctccctcggtcatcacgccggatcccgagccagcccctgcgctttcgaaccca
ctcctagaggctctgaaaatgaagagtcctacgagctgtgcatcagctgccggcgccacc
acagtttcaacattgacgatgccggtaccgccgggcgtctcaagcctgaaggcgcagccc
atagctgacgccctgaagccgtggcccgtctcccagtctcagcctgctcgtagcagcgtg
gaccagacctctgccttcactcaagtcccaggccaggtttccaaggctgccagcggcgct
ccctcattacctcccgctggcccgttaacatcgtcgagccagctcggcggtggtcccgct
gcgtgctccgctcctaagccccccctggtcacgaccgccgtgctcagtcactccaaccct
ctgccggcctcaggtttcaaacccatttttgccgtcgccgcctccgccccgttaattgta
acgagcctagagagcaaacctacggtccaaaacttcaaccctagttttggaagtagctcc
gccacggcgggctttgccaccgccgccacatccacaacagtctcaggtacggcaggagcc
accattgctccaccgtcatgcgcaacctccgccacaacgtcaggggcagtttctttaact
tgttcattatttggatcctcaacaagtagcaccgttgcttcttcgctcttccctgaagtg
gcctccacagcagctgccacctcaggctccaccagcagcacgacccccgcagcccagccg
tccacaaaatccatcttcggaacctggtcggcaccatcctcaatgaccgcgagtgccacc
tcagcgccagcttctacgccgggatttcagtttggagccggaggctccacaactcctgtg
gccgccattcccgcccccacctccacgagcgccttcacatttggagctgcacagacaaca
tctcaagtcgcaggccagaaggtgtttgcctttggtcaggccacagtcagtcaaaacaca
agcacggcttcgttcggaggtttggcgatggccgccgctgcccctgcatctgcggccaac
acggccaacgacggtgccgctggccccacgacccagcccacgttcacttttggaaagtcg
tcctttcaagcctcggggccccagtcgagcttcggctccacgctcgttgcacctaagccg
tttacctttggcggcgggtcagctgcatccgcttccaacgcgatgcctttcaactttggg
gcacctgccacctctgccgcggtaccgtcagcttttgtcacgccaagcaaaccagcgttt
ggaggtgcctcaaccgctttcgctttcggccaggccgctcagactcccggcgcgtcatcc
ttcacgttcggtggcggcggtccacagcagacaccctcgggccctgctccaccaccagca
tccggcggctttaactttggcgctaccatttcgcaaccgcagttcgggacacctgtcgcc
aataagatgggaggcttcaatttcggggctgccggcacatccactcccaatttccgtcag
agccccgccacagccactggtccaattccttttggaaatgccagcgcgccggtccaggct
ttcaatgctgctccttttggttcccaagcaactccttccttctccattggggcgggctca
aagccgagcggtgtgcggcaaagactgcaagcgcggaggcagcacaacaggaagaagtga
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