Syngnathus scovelli (Gulf pipefish): 125984137
Help
Entry
125984137 CDS
T08785
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125984137
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125984137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
125984137
NCBI-ProteinID:
XP_049602033
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MLMSTDVASIMLPVSRGIMDRERDIDTSAVPHTSAAGGPAAVRGMKRGDPEPDALAAAAL
TDLTGAECKRPRIDGTGNVIGDIGQNNEPLNPGFHGYTPHNQGPQDSTGAQDGLVAPAFT
AFPPPPPPQNGIAGTEFGPGAMFGAGGQGTAEVGAGAHEDTTSTTIDDNNKTDETSQGET
AIQCVTGGSAAGGSGGDSPEAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFN
ERGSKGFGFVTFETSADAEKAREKLHGTLVEGRKIEVNNATARVMTNKKMVSPYPNGEAL
STLPYAGWKLSPMVGAVYGPELYAVPGFPYPAAAAAATTAAAAAAFRGAHLRGRGRPVYS
AVRAAVPQAAIPAYPGVVYQDGFYGAADLYGGYPAAAAAAAAAAAYRYTQPAAVTGATAA
AAAYSDSYGRVYTTDPYHALAPAAAAYGVGAMASLYRAGYSRFAPY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctataatgctacccgttagtcgggggataatggac
cgagaaagagacatcgatacatcagcggtgccgcatacaagcgctgccggaggtccggcg
gcggtccgggggatgaagcgaggggacccggaaccagacgctcttgcagccgctgctttg
actgacctcaccggggcggagtgcaagagaccaaggatagacggcactgggaatgttatt
ggcgacatcggacagaacaatgagcctttaaatcctggtttccatggatacacacctcac
aatcaggggcctcaggattcaacaggagcacaggatggtttggtggcacccgcctttaca
gcgttccctcctccgccacctccccagaatggcatagctgggacagaatttggccccggg
gccatgtttggtgcagggggtcaaggaacagctgaggtaggcgctggtgctcatgaggac
accaccagtaccaccatcgacgacaataataagaccgatgagacctcccaaggggagacg
gctatacagtgtgtgactggggggtcagcagcagggggctctggaggagactcaccggag
gctaaaggaacccccaaacgtctccacgtttcaaacatcccattccgcttccgtgacccg
gacctcaggcagatgtttgggcaatatgggaagattctggacgtagaaattattttcaat
gagaggggctcaaagggctttggctttgtgacatttgagaccagcgcagatgccgagaaa
gcccgcgaaaagctccacggcacattggtggaaggtcgtaagattgaggtgaataacgcc
actgccagggtgatgactaacaagaaaatggtcagcccctaccctaatggagaggctctg
agcacgctaccctacgcagggtggaaattgagcccaatggtcggggctgtgtacggacca
gagctttatgccgtcccagggttcccgtaccccgcagcagccgcggcggctacgacagct
gcggcggcagctgcgttccgtggcgctcaccttcgtggacgggggcggcctgtctacagt
gcggtgcgggcagctgtgcctcaggctgctatccccgcataccctggcgtggtgtaccaa
gatggcttttacggcgctgcggacttatacggaggctatcctgctgccgccgctgccgcc
gccgccgccgctgcttatcgctacactcagcccgcggctgtaaccggagcaaccgcagca
gctgccgcatacagtgacagttacggccgggtttacacgacagatccataccacgcttta
gccccagctgctgccgcctacggggtgggagccatggccagtttatacagggcgggatac
agtcgcttcgctccatactaa
DBGET
integrated database retrieval system
