Syngnathus scovelli (Gulf pipefish): 125984205
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Entry
125984205 CDS
T08785
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125984205
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125984205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
125984205
NCBI-ProteinID:
XP_049602119
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MKRRGRCASSSHREVDAPAESSVTQPQPDHLYLYMETPSWAGNALCKSGSIGVFGNVVYS
GLLNEHLWHLGVPLFTRLGNQEAPNPADAMSQPYTAAQYPPPPQNGIPAEFAAPHPLPTP
DYSGQSRVAEHALTLYTPTPTHGEPAPGADSSTPSIAAPASAPVSVARHLQTLFLAGRQQ
SDDVTQTDASQHSDSSEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGS
KGFGFVTFETSTDADRAREKLNGTIVEGRKIEVNNATARVMTNKKVANPYTNGWKLNPVV
GAVYGPELYAVTGFPYPATGTAVAYRGSHLRGRGRAVYNTFRTAPPPPPIPAYGAVVYQD
GFYGAEIYGGYAAYRFAQPTTTAAYSDSYGRVYATADPYHHTIGPAATYSVGTM
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaagggggcgttgtgcttcttcatcccatcgtgaggtcgacgcaccagcagag
agttcagtgacacagcctcagcccgaccatctttacctgtacatggagacccccagctgg
gcaggtaacgcgttgtgcaagtcgggaagcatcggcgtcttcgggaacgtggtgtacagc
ggactgctcaacgagcacttgtggcatctgggagtaccgctcttcacgagactgggcaac
caagaggcccccaaccccgcggacgccatgagccagccctacaccgcggcccagtacccc
ccgcccccacagaacggcatccccgccgagtttgcggccccacacccgctccccacgccc
gactatagcgggcagagccgcgtggccgagcacgcgctgacgctgtacacgcccacaccc
acgcacggcgagccggcgccgggcgccgacagcagcacgcccagtatcgccgcccccgcc
tccgcaccggtcagtgtcgctcggcacctgcaaacactcttcctcgcaggccgccagcaa
tcggacgacgtgacgcaaacggacgcctcgcagcactcagattcgtcggagaagcagcag
cccaaacgattacacgtgtccaacattcccttccgcttccgggaccctgacctgaggcaa
atgtttgggcaatttggaaagatcttagacgtggagattatctttaacgagcgaggatcc
aagggcttcggctttgtaactttcgaaacgagcacagacgccgaccgcgcacgggagaaa
ctaaacggtacaatcgtagagggacggaagatcgaggtgaacaacgccacagcgcgagtg
atgaccaacaaaaaagtggccaacccctacaccaacggttggaagttgaatccggtggtg
ggcgccgtctacggtcccgagctgtatgccgtaacgggcttcccgtaccccgccacgggc
acggccgtggcctacagagggagccatttgcgaggtcgggggcgagccgtctacaatacc
ttccgcacggccccgccgccaccacccatcccagcatacggagcggtggtgtaccaagac
ggcttctatggcgccgagatctacggtggctacgcagcgtaccgattcgcccagcccacc
accaccgccgcctacagcgacagctacggcagagtctatgcaacggctgacccctaccac
cacacgatcggccccgccgccacgtacagcgtgggaaccatgtaa
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