KEGG   Syngnathus scovelli (Gulf pipefish): 125990585
Entry
125990585         CDS       T08785                                 
Name
(RefSeq) laminin subunit alpha-4
  KO
K06241  laminin, alpha 4
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04510  Focal adhesion
sscv04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125990585
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125990585
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_EGF Laminin_II Laminin_I Laminin_G_3
Other DBs
NCBI-GeneID: 125990585
NCBI-ProteinID: XP_049613881
LinkDB
Position
Unknown
AA seq 1870 aa
MAPKSICYLCLLGILTGIASLSSAVRFGTKQQTSLKVCAKGFFLSEQNKCLPCNCKGHAD
HCEDITGICHNCSDHSVGDFCEMCEDGYMLAPSQVGRHSCKPCACPLSVPSNNFAVHCDR
QGNIQRCKCKEGYAGHTCERCAPGYYGMPMKIGGSCKRCNCNGNSDPNLIFNWCHNVTGH
CQHCWSNTAGPNCERCAQGFYGDAIGAKDCRECECNKCGTSSCDDRTGVCHCKPGVTGRL
CDRCEEGYSGFSSCQGCQRCECRPASLRPTCHSLTHSCLCRPGAGGRYCERCLPGFWDYS
PSGCKKCDCESSHCDMHTGECLPEAATVNPCNISCDECIWHVIGDLRLSNKTLDHLRVGV
LNVSTGAAVNDRVKYYNYTAQHLQNQFYTWRNKMSEIKTETGEVEESTREVVSYIKKLSK
SETTVKSLGSQLDEETQQTLMLAKQFSKNLTDLNMRIEEMIHEWELYSVYQEADPELVRR
NTDEAINVVTKMRSLDLSTQGPLTIEESTEAHDLLRRIRQLEKKSLITQGHLTPLKSNLS
RFTANLSDAQSFLQNATSTIEKVRDMNNGNVLKVQRNEETLLKMVTEFTAIQNSTEKARE
IISKSQENVDEMDTLVQNVTQYHAAIDGASQKLMEKMEDLSSADTELVGRADEHAKELER
QATELEADLRDSDTNGFVQKAITAANVHINIAKYINDANITSLTTLNISQTANDSVTGIN
MQLDDLVVICGNVFKESVSLRSEQIEVETEVVDKLKYIEETRETLDKNTKKLEEIVQDIS
EIQTARTNDRLEYARKVAEGTLNRSAGVLETITPISNKVEEWAKNLNENKYSTVAYEQAI
DSAKESVEHLNFLVPELLDKLKVVEQKKPINNITTNVMRIRELIAQARSVAKKVQVSMKF
NGQSSVEIHADTSLEDLRAVTSISLFMRVDPDTDPIEDRFILYLGDKNGKKDYMGLAIKN
DNLVYMYKLGGEYIEIPLSSKPVSQWPAVFNYIKVERLGRHGKIYLVIPSQRSTDEQKFI
QKGEAPGTDSLFDVDPEDMVFFIGGVPPNATLPPPLTLAPFVGCIELASLNNDVISLYNF
KSTHKMDVVASPPCSRYKLAFSQSRIASYLFDGKGYALINNIERRGKIGYVTRFDISVRT
VANNGVLFIMVNADKFFLLEIKNGFLRLMYDFGFNDGPKLLEGNIPKLKINDARYHEISV
IYHQSKKVILLVDKSHVKSLENPKTTLPFSDIYIGGAPSNILLSRSELSAVVGLKGCVKG
FLFQKKDFNLLEEPGTIGISSGCPEESFASHKAYFMGESYLGSSAKMTPFDNFEGGLNFR
TVQASGLLFYHNEGPDEFSISLENGAVVMNTRGTRVKSHKKHYNDGNTHFLLASVNNHKY
LLLVDDKDKQEKKRPQSATRLTSDSTVKNFYFGGSPSGILKNFTGCITYAYINRQDRDIE
PEDFQRYTQNVQTFLQDCPVQKPAAALSRNRDDEHIAKRRQSRKVNRNESIHKLRSDSEV
NIAPCHLASHQATQHAYQYGSFANSRQHYKELPKSFSHKSNFSLSLKTNTSFGLIFYISD
IQEKNFMTLFLANGRLVYAFNVGNQRVEIWSNGNYNDGAWHNVIFIRNGSMGKLIIDGLT
VMEDRVMGKVVPWHVSSPLYFGGVPPKRAQKNIQSNTVNSFSGCLRNIQLNGHRLSSADE
TFGVTPCFEGPTEAGTFFAEQGGFILLDILDLGPRFQLEMEVRPRVTSGVLLHVPIAEGY
LSIYIYQGAVVAVLIDGTEELLATVSPRQSLCAGHWHRIAVMKDMNKLKLQVDQEVHSVD
GSLNLHSPITGKIFIGGAPDLSLAGSHVSKEPYVGCMRNLMINNSGVSFSDASLVSGAVS
IGSCPAVNQQ
NT seq 5613 nt   +upstreamnt  +downstreamnt
atggctcctaaatctatttgctacctctgccttttaggcattctcaccgggattgcctct
ttatcgtctgctgtcagatttggaacaaagcaacagacatcattgaaagtgtgtgctaag
ggatttttccttagtgaacaaaacaaatgcttgccttgtaactgcaaaggccatgcggat
cactgtgaggacatcacgggaatttgccataattgcagcgatcacagcgtgggtgatttc
tgtgaaatgtgcgaagatggttatatgctagcacctagccaggttggacgccatagttgc
aaaccctgtgcctgccctctctctgtcccctcaaataattttgcagtccattgtgacagg
caaggtaacattcaaagatgcaagtgcaaagagggttatgctggacatacctgtgagagg
tgtgcaccgggttactatggcatgccaatgaaaattggtggttcctgcaagcgatgtaac
tgtaatggcaactctgacccaaacctgatttttaattggtgccacaatgtaaccggccat
tgccagcactgctggagtaacaccgctgggccgaattgcgagaggtgtgctcaaggtttc
tacggcgatgccatcggtgccaaggactgcagagagtgtgagtgcaacaaatgtggtaca
tcttcatgtgatgacaggacaggagtgtgtcactgtaaaccaggggtcactgggagactc
tgtgaccgctgtgaggagggttactcgggtttctccagctgccaaggctgtcagagatgt
gaatgcaggccagcttctctccgtcccacctgccattccctcactcacagctgtctgtgc
cgcccgggtgctggaggacgttactgtgagaggtgtctcccaggcttttgggattatagc
ccctctggctgcaagaagtgtgactgtgagagcagtcactgtgatatgcacacaggagag
tgcctaccagaggctgcaacagttaacccatgcaatatcagttgcgatgaatgtatctgg
catgttattggagacttgcggctgtccaacaaaacactggaccatttgagggttggagtg
ttgaatgtttctaccggagctgcggttaatgatagagtcaaatattataactatacagct
caacacctgcagaatcagttttatacctggagaaacaaaatgtctgaaataaaaacagag
actggggaagtggaagagtcaacacgggaggtcgtatcgtacataaaaaaacttagtaaa
tcggaaactacagtgaagagtctggggagccagcttgatgaggaaacacagcaaactcta
atgctagctaaacagttcagcaaaaatctcactgacctcaatatgcgcattgaagaaatg
atccatgaatgggagctgtacagtgtttaccaggaagcggaccccgagttggtcaggaga
aacacagatgaagcgataaatgttgtgaccaaaatgaggagtcttgatttgtctacacaa
gggcctttaaccattgaagagtcaactgaagctcatgatttgttaaggcgtattcgtcag
ttggagaagaagtcactgattacacaaggtcatctcaccccactcaagtcgaatttgtct
cgctttacggccaacctgtccgacgcgcagtccttcctccagaatgcaactagtacaatt
gagaaggtgcgggatatgaacaacggcaatgtcctcaaagtccagaggaatgaggaaacg
ctgctgaagatggtaacagagttcacagctattcagaacagtacggaaaaagccagagag
ataatatctaaatcacaagagaatgtggatgagatggatacgttggtccagaatgtaaca
cagtaccatgctgcaattgatggtgccagccaaaagctgatggaaaagatggaagacctc
tcatctgctgacacagaattggttggaagggcagatgagcatgctaaagagcttgaacga
caggccaccgaactggaagcggacctgcgagatagtgataccaacggatttgtgcagaaa
gccataactgctgccaatgtccacatcaatatagctaaatacatcaacgacgccaatatc
acatcacttacaaccttgaatatatcccaaacagcaaatgactccgtcactgggatcaac
atgcagcttgatgatctagtggtaatatgcggcaatgttttcaaggagtctgtttcattg
cgttctgaacaaatagaggtagaaaccgaggtggttgataagctgaaatacattgaggag
acaagagagaccttggataaaaacaccaaaaaacttgaagaaattgtgcaggatatttct
gaaattcaaacagccagaactaacgaccgactggagtatgcacgcaaggtggctgaggga
acgctcaaccgatccgcaggagtgcttgagacaattacgcccattagtaacaaagttgag
gaatgggctaagaatctgaacgaaaataaatactctacagttgcctatgagcaagccatt
gattctgcaaaggaatcagtggaacacctcaattttcttgttcctgaacttttggataag
cttaaggtggttgagcagaagaagcctattaataacataactactaatgttatgagaatc
agagaactcatagcccaagccagaagtgtggcaaagaaggttcaagtgtctatgaagttc
aatggtcagtcatcagtggagattcatgctgataccagtttggaagatctgagggcagtg
acgtccatcagcttatttatgagagttgacccagacacagacccaatagaggaccgtttc
attttatatctgggagacaaaaatggtaagaaagactacatgggacttgccatcaagaat
gacaaccttgtgtacatgtataaacttggtggtgaatacattgaaatcccactgagctca
aaacctgtcagccaatggcctgctgtattcaactacatcaaagtagagaggttgggtcga
catgggaaaatctacctagtaatccccagtcagagatccacagatgaacagaaattcatt
cagaaaggcgaagctccgggaacggactcactttttgacgttgacccagaagacatggtg
ttctttattgggggtgtcccaccgaatgctacgctccctccacctttgactctggctccc
tttgtgggctgcatcgagttggcctcgctgaacaatgatgtaatcagtttatataatttc
aaaagcactcacaaaatggacgtggttgcatcaccaccatgttccaggtacaaactggct
ttttcacagagccgtattgcaagctatttatttgacggaaagggctatgcactgatcaat
aacatagaacggagggggaagattggttatgtcacaagatttgatatttcagtgcgaact
gtcgcaaacaatggcgtgcttttcatcatggtcaatgctgataaatttttccttttagaa
ataaaaaatggatttttacgcctaatgtatgattttggattcaatgatgggccaaaactt
ttggagggtaatataccaaagctaaaaataaatgatgcaagataccacgagatctcagtg
atctatcatcagtcaaagaaagttatccttctggtggacaagagtcatgttaaatctttg
gagaatcccaaaactactttgccattctcagacatctacataggtggagcaccctcaaac
attctcctatctaggtccgagctatctgctgtggttggcctcaaaggttgtgtcaaaggc
ttcctattccagaaaaaagactttaacctcttggaggagcctggcaccattggcatcagt
agtggctgccccgaggagtcctttgcatctcataaagcctatttcatgggtgagagctat
ttgggatcttcagcaaagatgacaccatttgacaattttgaaggaggcctcaactttaga
accgttcaagccagtggattattattctatcacaatgaagggccggacgaattcagcatt
tcccttgaaaacggagcagtggtgatgaacacgcgtggaacaagagtaaaatcacataag
aaacactacaatgacggaaatacacactttttattggcctcggtgaataatcacaagtat
ttattattggtggacgataaagacaagcaggagaagaaacggccacagtcagccacaaga
ctcacttctgattcgacagtaaagaacttctactttgggggatcaccaagtggtatctta
aagaactttacaggctgcatcacttatgcctacataaacaggcaagaccgagatattgag
ccggaagacttccagcgctacacccagaatgtccaaactttcctgcaagactgtccagtg
caaaagcctgctgctgctctttcgagaaacagggatgatgaacatatagccaaacgtagg
caatctcgtaaggttaacaggaatgaatccatccacaaattaagaagtgacagtgaagtg
aacattgcaccctgccatcttgcaagtcaccaagcaacacaacatgcctaccaatatggg
agctttgcaaacagtaggcagcactacaaagagctccccaaatccttttctcataagtcc
aacttttccttatccctaaagaccaacacatcgtttggcctcattttttatatatctgac
attcaagagaaaaattttatgactctctttctggccaatggtagacttgtatacgccttc
aatgtaggtaatcagcgagtggaaatctggagcaacggaaattacaatgatggagcatgg
cataatgtgatttttatacgtaatggaagtatgggaaaattgataatcgatgggctcaca
gtgatggaggacagagttatgggcaaagttgtgccctggcatgtcagcagtcctctctat
tttggaggcgtacctccaaagcgagcacaaaaaaatattcagagtaacacagtaaacagc
ttttctggctgtttgagaaatattcagctcaatggacaccggttgtcatcagcggatgaa
acatttggggtcacgccatgttttgagggacctactgaggcaggaacattctttgcagag
caaggaggcttcatacttttggacatacttgacttgggacctagatttcagctagaaatg
gaggtgcgaccccgtgtgacatcaggtgtacttctccatgtgcccatagcagagggttat
ttatcaatatacatttatcaaggagcagtcgtagctgttttgattgatgggacggaggaa
ttattggcaacagtttctccaagacagtctctgtgtgctggccactggcatagaattgca
gtgatgaaagatatgaacaaactcaagttgcaagtagaccaagaggtccacagtgtggat
gggtctcttaatcttcattctccaatcaccgggaagatttttattggtggagccccagat
ctctcccttgcaggcagccatgtaagcaaggagccttatgtaggttgtatgaggaacctg
atgatcaacaacagtggtgtaagcttcagtgacgcatctctagtcagtggagcggtcagc
ataggatcctgtccggctgtgaatcaacagtaa

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