Syngnathus scovelli (Gulf pipefish): 125990623
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Entry
125990623 CDS
T08785
Name
(RefSeq) kinetochore scaffold 1 isoform X1
KO
K11542
protein CASC5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125990623
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125990623
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125990623
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125990623
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
KMN network proteins
125990623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MELT
Knl1_RWD_C
Motif
Other DBs
NCBI-GeneID:
125990623
NCBI-ProteinID:
XP_049613958
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MEPLHSDKNDENSGGSYRRRISSILKTPRKSAKFPDPNQQEKEVECAKPVDKRNSRRVTF
ALANDVLLYSKDAKNASLVRSPFQELMSAASVPGENSAQVSVSEDGIHQKMGMDPLIGAP
LHVYEQKGNANIEPGEVFGEKTVTFSGEDSFMEMTQSQTINITGHQDYLVGASQNNRTLL
SCGKKTAMSSGDGKSMKLSLGHGANGFDPFFNNLLARLPSPYGSNVEPDETTLDMSQITT
GDVDKENQDPTLVHSEMGTIGLCQDEESKMDMTVSHTGHIAGSIDDADDPFRCFFPQQEM
YSQSGTASQASPTTKTLQKHTRITLGSPNLEDTFKKQSTEKKMIFTAEDACMDMTDANLD
NFFHEEKSALFASSMEKKRVTTGQSASSEKNVDPKFEEFLAKVFKTNGTQVNPGHSGMAQ
INPLAKATEEPCNGSPIHPKDNLTIDMTEFQRCDIQRCLPAQVRHPKGRQTAFHQLFPDN
LPTSDERTVRFTANDGTMDMTQSLTVNIDTPFEPGTLKNTGGENTVIKFSANDVAMDVTQ
SLTSVIDTQLEPEVPKSIRGVPAGEEKTIRFSGNDTAMDMTQVIDTPFEPEAHHNTRKEK
LVRYSSNGVEMDVTGNLTANIATYLELGAPHNKPTKKEGTIQFSAKHDAMDMTQSLTSVI
DTQSEPEVPKNVHRVPAGEETTIRFSANDAAMDITQSLTAAIDTRLEPEVPKNIRRVPAG
EEKMIRFSANDAAMDMTQSLTAAIDTQLEPEVPKNVYRVPAGEEKTIRFSANDAAMDMTQ
SLTAAIDTQLEPEVPKNIRRVPAGEEQAIRFSATDAVMEMTQSLTAAIDTQLKPEVPKNI
RRVSAGEEKTIRFSANDAVMDMTQSLTAAIDTRLEPEVPKTVHRVPAREEKTIQFSGNDV
TMDVTQSLTAAIDIQLEPEIPQNIRRVPAGEEKMIRFSANDAAMDMTQSLTSVIDTQGEP
EVPKNICHVPAGEEKMIRFSANDAAMDMTQSLTSVIDTRLEPEVPRNIHRVPAGEEKIIR
FSANDAAMDMTQSLTSVIDTQSEPEVPKNIHHVPAREEKTIRFSANDAAMDMTQSLPTRF
ETSQDAVESPDPVNSEETQNSKEAELRNKTSPLSQKLSSPSTTDHGRHSSPSRKSRRSSI
ADLQLKLRRLSHKMTSEVILPDSTAFLPNLDSDADKSTKYNNDLPVSEFVPDIKTGSGNV
EDSETQSGPQGTAIVGSPFAFKTTELMSTLSTGGFKQKLPQRKTRSNQSNSQEKSVSWTK
IDNIVDKLKTWNDGDVRNICDEELVSCDESFQILYDKSPPKENSFIMEEFSIDEVFLNNV
LQENTPDGVQGTKRCLASDEHDTENKKKMKSSSVMFPETVATEIQAQVLEIDHRADTTTI
PSSSNHTMDSSSSTRSNISSCDATFNPTFKHSMMESHLEDREVQKLKDGSITVLEFLRLF
NIDFVIHEPRQSILPDKFPHTTGCSAMDVLKNRHVYHPKKTVYEADFNNLSEKVERLNYR
MLDKNKSLKVINYQLWDDLKDWTEKEIKSFGVKLKERHNFYRKMSKIHRHEMKEVLYSNL
VQTLKDEQQKFKSTIESNEMIKILDDCICDLEAELAAVEDKGGEDMPSLKSLQEEMIKVN
EALDDKNRQICELELEKTQASGKLVKLKAETKNLQSFIGVLEKLTEWRVREKTETHTLYT
FLYDTLRLQLVHAGAEPDRKTSRINFKFVLDDEKSQSHARITHKLLSQHIEFETAWVEKY
PTNSHIPKLLHDLSLVVSTCRLLGEELRLLKMWGGSRLNIVDVSCQDTRVNIVFSSLRRR
SRFEVVLSVSLAKQCYVLHVHSFRNFFGDARAEQIDQILKSFSTGRNLLTKTIKKINCDL
LC
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggagcccttgcactctgacaaaaatgatgaaaacagtggaggctcctacaggagacga
atatcttctattcttaaaactccacgtaaatctgcaaaattccccgatccaaatcaacag
gaaaaagaggttgaatgtgccaaaccagttgataaaagaaattccagaagagttactttt
gcactagccaatgatgttcttctttattccaaggatgcgaaaaatgcctcgctggtccga
agtccatttcaagagttaatgtctgcagcatcagtgccaggagaaaatagtgcccaagtg
tcagttagtgaagatgggatccatcaaaaaatgggaatggacccactgataggtgcacct
cttcatgtctatgaacaaaaaggaaatgccaacattgaaccaggagaagtctttggagag
aaaacagtgacgtttagcggggaggatagcttcatggagatgacccagagtcaaacgatc
aacatcactggccatcaagactatcttgtaggtgcttcacagaacaatagaaccttgctt
tcttgtggaaagaagacagcaatgtcctcaggagacggcaaatcaatgaaattgagtctc
ggtcacggcgcaaacggttttgatccttttttcaacaacttgcttgctcgtcttccaagc
ccatatggatcaaatgttgaaccagatgaaaccacgttggacatgtctcagattacaaca
ggagatgtggataaggaaaatcaagatccaactttggttcattctgaaatggggactatt
ggactctgtcaagatgaagagagcaagatggatatgacagtttctcacacgggccacatt
gcaggatcgatagatgatgctgatgatccctttcggtgttttttcccccaacaagaaatg
tattcccagtctggcacggcatcacaagcaagccccaccacaaagaccctgcagaaacac
accagaatcaccctgggatcacccaatctagaagatactttcaaaaaacaatccacagag
aagaaaatgatattcactgcagaagatgcctgtatggacatgacagatgcaaatttggac
aattttttccatgaagaaaaatcagccctttttgcgtcatctatggaaaagaaaagagtg
actactggccaatcggcttcatctgaaaaaaatgtggaccccaaatttgaagaattcctt
gcaaaagtcttcaaaacaaatggcacccaagttaatcctggacattctggaatggctcag
attaaccctctcgctaaggcaactgaggaaccatgtaatggaagtccaatccatcccaaa
gataacttgaccatagatatgaccgaatttcaaagatgcgatatccaacgttgcctacct
gcgcaggtaaggcaccctaaaggtcgacaaaccgcttttcatcagttgttccctgacaat
ctacctaccagtgatgagagaactgtgaggttcacagcaaatgacggtacaatggatatg
acccaaagtcttaccgtgaacattgatacgccatttgaaccaggcacactcaaaaatact
ggaggagagaatacagtcattaagttttctgcaaatgacgtagcgatggatgtgacgcaa
agcctcacctcagtaattgatactcagctggagcctgaagtaccaaaaagtatccgtggt
gtacctgcaggagaagaaaaaacgattaggttttcaggaaatgacacagcgatggatatg
acgcaagtgattgacactccctttgaacctgaagcacatcacaatactagaaaagagaaa
cttgtcaggtattcatcaaatggtgttgagatggatgtgacgggaaacctgaccgcaaat
attgctacatatttggaactaggagcaccccacaataagcctactaaaaaagagggaaca
atccagttttcagcaaaacatgatgcaatggatatgacacaaagcctcacctcagtaatc
gatactcagtccgagccagaagtaccaaaaaatgtccaccgtgtacctgctggggaagaa
acaacgatccggttttcagcaaatgacgcagcgatggatataacgcaaagcctcacggca
gcaattgatactcggcttgagccagaagtaccaaaaaatatccgtcgtgtgcctgctgga
gaagaaaaaatgatccggttttcagcaaatgacgcagcgatggatatgacgcaaagcctc
acagcagcaattgatactcagcttgagccagaagtaccaaaaaatgtctatcgtgtacct
gctggagaagaaaaaacgataaggttttcagcaaatgacgcagcaatggatatgacgcaa
agcctcacggcagcgattgatactcagctcgagccagaagtaccaaaaaatatccgtcgt
gtacctgctggagaagaacaagcgatcaggttttcagccacagacgcagtgatggaaatg
acgcagagcctcacggcagcgattgatactcagctcaagccagaagtaccaaaaaatatc
cgtcgtgtatctgctggagaagagaaaaccatcaggttctcagcaaatgatgcagtgatg
gatatgacgcaaagcctcacggcagcgattgatactcggcttgagccagaagtaccaaaa
actgtccaccgtgtacctgctcgagaagaaaaaacgatccagttttcaggaaatgatgta
acgatggatgtgacacaaagcctcacggcagcgattgatattcagctcgagccagaaata
ccccaaaatatccgtcgtgtacctgctggagaagaaaaaatgatcaggttttcagcaaat
gacgcagcgatggacatgacgcaaagcctcacctccgtaattgatactcagggcgagcca
gaagtaccaaaaaatatttgtcatgtacctgctggagaagaaaaaatgatccggttttca
gcaaatgacgcagcgatggacatgacgcaaagcctcacctccgtaattgatactcggctt
gagccagaagtaccaagaaatatccatcgtgtacctgctggagaagaaaaaataatcagg
ttttcagcaaatgacgcagcgatggatatgacgcaaagcctcacctccgtaattgatact
cagtccgagccagaagtaccaaaaaatatccaccatgtacctgctcgagaagaaaaaacg
atccggttttcagcaaatgacgcagcgatggatatgacgcaaagcctccccacaagattt
gaaactagtcaagatgcagtagaaagtccagatcctgtcaactcagaagaaactcaaaat
agcaaagaagctgaattgagaaataaaactagtcccttatcgcaaaagttaagttcacct
agtaccactgaccatggcagacattcaagtccctcaaggaagtctagacggtcaagtatc
gctgatcttcagttaaaattaaggcgcttgagccacaaaatgacctctgaggtcattctt
ccagacagcactgcatttttgccgaatttggattctgacgctgacaaaagcacaaaatac
aacaacgaccttccggtatcggaatttgtcccagatattaaaacaggctcaggaaacgta
gaggattccgaaacacaatccggtccgcaaggaactgcaattgtgggatccccttttgcg
ttcaagacgacagaactgatgtcaacactatcaactggaggctttaagcaaaaactccca
caaagaaaaactcgatccaaccaaagcaactctcaggagaaatctgtgagttggacaaaa
atcgacaatattgtcgataaactgaaaacgtggaacgacggtgacgtgcgtaacatttgc
gatgaagagctcgttagctgtgacgagtccttccaaatactctacgacaaaagtcccccg
aaagaaaattcatttattatggaagagtttagcatcgatgaagtcttcctgaacaatgtt
cttcaagaaaacaccccagatggagtccagggaactaaaagatgcttggcatcagatgaa
cacgatacagagaacaaaaagaaaatgaaatcgtccagcgtgatgttccctgagactgtt
gcaacggaaatacaggctcaagttctcgaaatcgatcatcgtgcggacaccaccacaatt
ccatcctcgtcaaaccacacgatggattcttccagcagtactcgctcaaacatcagctcg
tgtgatgctacatttaatcctactttcaaacacagcatgatggaatctcatcttgaagac
cgtgaagtgcagaaattaaaggatggcagtataaccgtgcttgagttcttaagactgttc
aacatagactttgtgatccatgaaccgaggcaaagcatccttcctgacaaatttccacat
accactggttgctcggcaatggatgtattaaaaaacagacatgtatatcatcctaaaaaa
acggtctatgaagctgatttcaataacctctctgaaaaggtggaaaggctgaattacaga
atgttggacaaaaacaaatctctcaaggtgatcaattaccaattgtgggatgatttgaaa
gactggacagaaaaggagatcaaatcttttggtgtaaaactaaaagaaagacacaatttc
tacagaaagatgagcaaaatccacagacatgaaatgaaggaggtcctgtattcaaacctt
gtacagactcttaaggatgagcagcagaagttcaaaagtacaattgaatcgaacgagatg
atcaaaattctggatgattgcatttgtgatttggaagcagaactagctgcagttgaagac
aaaggaggtgaagacatgccaagtctgaagtcacttcaagaagagatgataaaagtcaat
gaggcattggatgacaaaaaccgacaaatatgtgaactggagttggagaaaactcaagct
tcaggaaaattggtcaagttgaaagctgagacaaaaaatcttcagagcttcatcggcgtg
cttgagaagctgaccgaatggagagtcagagaaaagacggaaacacacaccctgtacact
ttcctctacgacacattgcgtttacagctggtgcacgcaggagcggaacctgatcggaaa
acatcccggatcaatttcaaatttgtccttgatgatgaaaagtcacagagccacgcacgc
attactcacaaactgctgtctcagcatatcgagtttgaaacagcctgggtggagaagtac
ccaacaaatagtcacatcccaaagctgctccatgacttgtccttggtggtgagtacctgt
cggctcttgggggaggagttgcgactcctgaaaatgtggggaggttcacggctcaacatt
gtggacgttagctgtcaggacactcgggtgaatattgtcttcagcagtctgaggagacgt
tccaggtttgaggtcgttttgtcagtcagcttggccaaacagtgctatgttcttcatgtg
catagctttcgaaacttctttggagatgcaagggccgagcaaattgaccagattctcaag
tctttctccacaggcagaaacctattgacaaagactatcaaaaagatcaactgtgattta
ctttgttga
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