Syngnathus scovelli (Gulf pipefish): 125991623
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Entry
125991623 CDS
T08785
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125991623
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125991623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
125991623
NCBI-ProteinID:
XP_049615662
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MHPEKDKTAIFHDCKPADDSTCSHFHNHLRHRFPLNEDTLRLVQRRPFITNSRLYMETPI
WAETKPGVFKPGPIALFGNVLYSGLFNEHFWHFGVPLVTRLGNQEAPAPPEAMAQPFPPA
QYPPPPQNGMPAEFATPHTHPPTDFTGPNTVAEHALTLYTPTHTQSEQAVNDSNVPALTA
NTVTFCLLKDGFSGEAVWRECSPHHSYKQVDDVAQTDGSQHLHLQPSDSSEKQQPKRLHV
SNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETTADADRAREKLNGTIV
EGRKIEVNNATARVMTNKKVANPYTNGWKLNPVVGAVYGPEFYAVTGFPYPTTGAAVAYR
GAHLRGRGRAVYNTFRAAPPPPPIPAYGASVVYQDGFYGAEIYGGYAAYRYAQPAATAAA
AYSDSYGRVYATADPYHHTIGPAATYTVGTMASLYRGGCSRFTPY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcacccagagaaggacaaaactgccatctttcatgactgtaagccagcagacgactca
acctgctctcatttccacaatcatcttcgccacaggtttccattaaatgaagacacgtta
agacttgtccagcgcaggcctttcattacgaacagtcggctgtacatggagacccccatt
tgggcagaaactaagcctggtgtgttcaaaccgggacccatcgctctgtttgggaacgtg
ctatacagtgggctcttcaacgaacacttttggcattttggcgttcccctcgtcaccaga
ctgggtaatcaagaggccccagctccgcctgaagcaatggctcagccctttccaccggcc
cagtacccgcctccaccacagaacgggatgcccgctgagtttgccacaccccacactcac
ccaccgaccgacttcacaggaccaaatacggtcgccgaacacgccctgacgctgtacacg
ccgacacacacgcagagtgaacaagctgtgaatgacagcaacgttccggcactcacagcc
aacacagtcacgttttgcttgcttaaagatggtttctcaggggaagctgtgtggagagaa
tgttctcctcaccacagttacaagcaggtagatgacgttgcgcagacggacggttcgcag
catcttcacctgcagccaagtgactcttcagagaagcagcagcctaaaagattacatgtc
tccaacatacctttccgtttccgggaccctgacctccgacaaatgtttgggcaatttggc
aagattttggatgtggaaattatctttaatgaacgaggctccaagggctttgggtttgta
acatttgaaacgaccgcagatgctgatcgcgcacgggagaaactaaatggtacaatcgta
gagggccgcaaaatcgaggtcaataatgccacagcaagagtaatgaccaacaaaaaagtg
gcaaacccttacacaaacggctggaagctgaatccagtggttggagctgtctatggtcct
gaattttacgcagtcacagggtttccttaccctaccacaggagcagcagtggcctataga
ggggcccatttgagagggaggggccgagctgtctataacacgttccgcgccgcaccaccc
cctccgcccatcccagcctacggagccagtgtggtctaccaagatggattttacggtgca
gaaatttacggtggctatgcagcttacagatatgcccagccagctgctactgctgcagcc
gcatatagtgacagttatgggcgagtctatgcaacagcagacccatatcaccacacgatc
ggtcctgcagccacctatacggttggcactatggctagcctttacagaggagggtgcagt
cgcttcactccctactag
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